RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SOX18P35713 384 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 CD79BP40259 229 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 ZRANB3Q5FWF4 1079 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 CRB2Q5IJ48 1285 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 SFRP4Q6FHJ7 346 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-203ENST00000349748 KIAA1211LQ6NV74 962 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 MZT2AQ6P582 158 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 PTOV1Q86YD1 416 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 DBF4BQ8NFT6 615 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 POM121Q96HA1 1249 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 GSDMCQ9BYG8 508 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 RHBGQ9H310 441 aa10.06□□□□□ -0.8
CAPN3-203ENST00000349748 BARX1Q9HBU1 254 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-203ENST00000349748 TMEM218A2RU14 115 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 URADA6NGE7 173 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ZBTB42B2RXF5 422 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CLDN4O14493 209 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CDC123O75794 336 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 RECQL4O94761 1208 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 AKAP5P24588 427 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 SLC6A4P31645 630 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 DCDP81605 110 aaKnown RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ZXDBP98169 803 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 NCF4Q15080 339 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 MYLKQ15746 1914 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 TEX30Q5JUR7 227 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 DNAJB7Q7Z6W7 309 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ASPGQ86U10 573 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 NR2C2APQ86WQ0 139 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 MARCH9Q86YJ5 346 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 NAXDQ8IW45 347 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 SAMD12Q8N8I0 201 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 NEIL3Q8TAT5 605 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 PAPPA2Q9BXP8 1791 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 C20orf85Q9H1P6 137 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 OR10A4Q9H209 315 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CBY1Q9Y3M2 126 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 TRBV23OR9-2A0A075B6M9 112 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 A0A0A6YYC8 382 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CD8B2A6NJW9 211 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 I3L1I5 382 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 NIPSNAP2O75323 286 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 WNT1P04628 370 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CD8BP10966 210 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 NQO2P16083 231 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ACHEP22303 614 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 EFNA5P52803 228 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF155Q12901 538 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 MPZL3Q6UWV2 235 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 TGIF2LXQ8IUE1 241 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 SLC30A8Q8IWU4 369 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 FBXO16Q8IX29 292 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 AQP11Q8NBQ7 271 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 MARS2Q96GW9 593 aaKnown RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CAPNS2Q96L46 248 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 LRR1Q96L50 414 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 TCEAL7Q9BRU2 100 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 POLDIP3Q9BY77 421 aaKnown RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CDT1Q9H211 546 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 REEP4Q9H6H4 257 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 RHCGQ9UBD6 479 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 FTSJ1Q9UET6 329 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ZAR1LA6NP61 321 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 TLR4O00206 839 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 RFXANKO14593 260 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 SUV39H1O43463 412 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 OR2T1O43869 369 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 KHDRBS3O75525 346 aaKnown RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 S100A3P33764 101 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CHI3L1P36222 383 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 PITPNBP48739 271 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 RPP30P78346 268 aaKnown RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 DGCR2P98153 550 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 MAP4K2Q12851 820 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 SLC10A6Q3KNW5 377 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 LRIF1Q5T3J3 769 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 H3F3CQ6NXT2 135 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CEACAM20Q6UY09 585 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 TSPAN33Q86UF1 283 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 FAM46DQ8NEK8 389 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 CHFRQ96EP1 664 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ZC3H10Q96K80 434 aaKnown RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ZFP3Q96NJ6 502 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF382Q96SR6 550 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 TLNRD1Q9H1K6 362 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 RPF1Q9H9Y2 349 aaKnown RBP10.05□□□□□ -0.8
CAPN3-203ENST00000349748 C2orf42Q9NWW7 574 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF69Q9UC07 566 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 BACE2Q9Y5Z0 518 aa10.05□□□□□ -0.8
CAPN3-203ENST00000349748 EVPLQ92817 2033 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 TMEM229AB2RXF0 380 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 NEDD8-MDP1E9PL57 170 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 CLIC1O00299 241 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 PSMD3O43242 534 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 SLC19A2O60779 497 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 STX11O75558 287 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 GASTP01350 101 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 UGT2B7P16662 529 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 CRISP1P54107 249 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms