RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ALKAL2Q6UX46 152 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 C16orf59Q7L2K0 433 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 MS4A15Q8N5U1 240 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 OR1S1Q8NH92 325 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CRAMP1Q96RY5 1269 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 KATNB1Q9BVA0 655 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 SEMA4CQ9C0C4 833 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ACKR4Q9NPB9 350 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 DCAF16Q9NXF7 216 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 SLC7A11Q9UPY5 501 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 V9GYS6 101 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 RIC1Q4ADV7 1423 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 NEO1Q92859 1461 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ABCA2Q9BZC7 2435 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 B3GALT2O43825 422 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 BCKDHBP21953 392 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CCKBRP32239 447 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 TAS2R19P59542 299 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 RAB1AP62820 205 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 BEX3Q00994 111 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CLPPQ16740 277 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 MEP1BQ16820 701 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 STEAP3Q658P3 488 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 UNQ6126/PRO20091Q6UXV3 157 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 SYT13Q7L8C5 426 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 OR4E2Q8NGC2 313 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 OR6S1Q8NH40 331 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 GAB3Q8WWW8 586 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CXorf40BQ96DE9 158 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 HAPLN3Q96S86 360 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 SEMA3CQ99985 751 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ALG12Q9BV10 488 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 PKIBQ9C010 78 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ARHGAP39Q9C0H5 1083 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 SLC25A32Q9H2D1 315 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 NLE1Q9NVX2 485 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 GAB2Q9UQC2 676 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 M0R2Z0 102 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CACNB4O00305 520 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 TP53P04637 393 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 CDKN2BP42772 138 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 MTNR1AP48039 350 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 RPIAP49247 311 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 RAB13P51153 203 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 TPPP2P59282 170 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ADIRFQ15847 76 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 TMEM97Q5BJF2 176 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ZNF547Q8IVP9 402 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ZNF695Q8IW36 515 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 LGI2Q8N0V4 545 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 PLD6Q8N2A8 252 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 ZSCAN4Q8NAM6 433 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 BRIX1Q8TDN6 353 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 SLCO2A1Q92959 643 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 FCRL3Q96P31 734 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 ZCCHC4Q9H5U6 513 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 RIOX1Q9H6W3 641 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 LMAN1LQ9HAT1 526 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CYB5R1Q9UHQ9 305 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 FBXO10Q9UK96 956 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 A0A1B0GVT2 93 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 J3KR12 359 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 TCAPO15273 167 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 LATO43561 262 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CLIC3O95833 236 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 C1GALT1C1LP0DN25 315 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ENGP17813 658 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 PSMB3P49720 205 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 PPP1R3AQ16821 1122 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 POMZP3Q6PJE2 187 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 WDR74Q6RFH5 385 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 ZNF620Q6ZNG0 422 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 LIX1LQ8IVB5 337 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 FAM86B1Q8N7N1 296 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 OR13C5Q8NGS8 318 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 SCARB1Q8WTV0 552 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 MED18Q9BUE0 208 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 FAM124BQ9H5Z6 455 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 IL20Q9NYY1 176 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CPNE7Q9UBL6 633 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ADAMTS6Q9UKP5 1117 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 NUP210LQ5VU65 1888 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 LPCAT3Q6P1A2 487 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 NXPE4Q6UWF7 544 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ERN2Q76MJ5 926 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 FRMD1Q8N878 549 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 M1APQ8TC57 530 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 STYXQ8WUJ0 223 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ZNRF4Q8WWF5 429 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 LDAHQ9H6V9 325 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 AKTIPQ9H8T0 292 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CRLF2Q9HC73 371 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 FAM120CQ9NX05 1096 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 GPR83Q9NYM4 423 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 C17orf112F2Z3M2 114 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 HPGDSO60760 199 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 LGI1O95970 557 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CCKARP32238 428 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 CSKP41240 450 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 MLLT10P55197 1068 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms