RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 TRIM46Q7Z4K8 759 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 ZBTB44Q8NCP5 570 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 CHFRQ96EP1 664 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 LGR4Q9BXB1 951 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 ZNF436Q9C0F3 470 aaPredicted RBP11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 XKR8Q9H6D3 395 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 SH2B3Q9UQQ2 575 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 MEIS3P1A6NDR6 274 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 FXYD6P3P58550 94 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 C22orf39Q6P5X5 142 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 CRTC1Q6UUV9 634 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 RBM45Q8IUH3 476 aaKnown RBP11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 RBPMSQ93062 196 aaKnown RBP11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 ADAD1Q96M93 576 aaKnown RBP11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 ZNF558Q96NG5 402 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 SRRQ9GZT4 340 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 TOR1AO14656 332 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 NDUFS4O43181 175 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 SIX6O95475 246 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 FBXO45P0C2W1 286 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 SNRPBP14678 240 aaKnown RBP11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 HSD3B2P26439 372 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 PLK5Q496M5 336 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 CCDC190Q86UF4 302 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 CLDN22Q8N7P3 220 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 CCDC107Q8WV48 283 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 ST6GAL2Q96JF0 529 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 MFFQ9GZY8 342 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 COMMD4Q9H0A8 199 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 MED31Q9Y3C7 131 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 YIPF1Q9Y548 306 aa11.86□□□□□ -0.51
SSX2IP-201ENST00000342203 WASH4PA8MWX3 477 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 PRH1P02810 166 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ACP5P13686 325 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ACADLP28330 430 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 GRK5P34947 590 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ARL4DP49703 201 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 TAP2Q03519 686 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 SEC23BQ15437 767 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 TP53I3Q53FA7 332 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 SLC22A10Q63ZE4 541 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 WDR53Q7Z5U6 358 aaPredicted RBP11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 BEST3Q8N1M1 668 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 TMEM185AQ8NFB2 350 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 CXorf40BQ96DE9 158 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 SLC25A18Q9H1K4 315 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 LINC00597Q9H2U6 94 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ZNF226Q9NYT6 803 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 NLGN3Q9NZ94 848 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 SLC23A1Q9UHI7 598 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 HHLA1C9JL84 531 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 TMEM107Q6UX40 140 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 STX12Q86Y82 276 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 WDR20Q8TBZ3 569 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 DDOQ99489 341 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 FBXL12Q9NXK8 326 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 NDOR1Q9UHB4 597 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 PCDHGB7Q9Y5F8 929 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 DDX60Q8IY21 1712 aaKnown RBP11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 DDX6P26196 483 aaKnown RBP eCLIP11.85□□□□□ -0.517e-12■■□□□ 12.9
SSX2IP-201ENST00000342203 E2F1Q01094 437 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 COL28A1Q2UY09 1125 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 KLHL26Q53HC5 615 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 C18orf63Q68DL7 685 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 HSPA12BQ96MM6 686 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 TRIB3Q96RU7 358 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 QRSL1Q9H0R6 528 aaKnown RBP11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 TCRBP04435 133 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 TRAPPC2P0DI81 140 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 TRAPPC2BP0DI82 140 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 SLC11A1P49279 550 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 NLRP8Q86W28 1048 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 MSRB3Q8IXL7 192 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 JAGN1Q8N5M9 183 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ZDHHC1Q8WTX9 485 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ZNF354BQ96LW1 612 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 OPALINQ96PE5 141 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 PKMYT1Q99640 499 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ZNF639Q9UID6 485 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 PCDHGB1Q9Y5G3 927 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ALS2Q96Q42 1657 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 SOX30O94993 753 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 LIPCP11150 499 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 AHCYP23526 432 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 IFITM2Q01629 132 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ACSM3Q53FZ2 586 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 METTL2BQ6P1Q9 378 aaKnown RBP11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ALKAL1Q6UXT8 129 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 HORMAD2Q8N7B1 307 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ZNF527Q8NB42 609 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 FBXO15Q8NCQ5 510 aaPredicted RBP11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 OR52E4Q8NGH9 312 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 ZNF563Q8TA94 476 aa11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 C7orf50Q9BRJ6 194 aaKnown RBP11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 LYARQ9NX58 379 aaKnown RBP11.85□□□□□ -0.51
SSX2IP-201ENST00000342203 GOSR2O14653 212 aa11.84□□□□□ -0.51
SSX2IP-201ENST00000342203 CCL16O15467 120 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms