RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TTC9Q92623 222 aa9.88□□□□□ -0.83
SPTBN1-201ENST00000333896 MOCOSQ96EN8 888 aa9.88□□□□□ -0.83
SPTBN1-201ENST00000333896 SLC38A3Q99624 504 aa9.88□□□□□ -0.83
SPTBN1-201ENST00000333896 MICU1Q9BPX6 476 aa9.88□□□□□ -0.83
SPTBN1-201ENST00000333896 DPEP3Q9H4B8 488 aa9.88□□□□□ -0.83
SPTBN1-201ENST00000333896 DTLQ9NZJ0 730 aa9.88□□□□□ -0.83
SPTBN1-201ENST00000333896 CACNA1IQ9P0X4 2223 aa9.88□□□□□ -0.83
SPTBN1-201ENST00000333896 COL3A1P02461 1466 aaPredicted RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 HEATR5BQ9P2D3 2071 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 CD8B2A6NJW9 211 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 BCHEP06276 602 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 CD8BP10966 210 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 RARRES1P49788 294 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SNU13P55769 128 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 UBE2KP61086 200 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 H3F3CQ6NXT2 135 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 NRARPQ7Z6K4 114 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 GIMAP1Q8WWP7 306 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SORCS1Q8WY21 1168 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SLC7A6Q92536 515 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 C14orf79Q96F83 325 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 RNF19AQ9NV58 838 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 RGPD1P0DJD0 1748 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TCRBV7S2A1N4TA0A589 114 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 KIAA1324LA8MWY0 1029 aaPredicted RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 FMO6PO60774 539 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 PTGER3P43115 390 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TMEM198Q66K66 360 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF585AQ6P3V2 769 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF783Q6ZMS7 281 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 C1orf52Q8N6N3 182 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TTLQ8NG68 377 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 PROKR1Q8TCW9 393 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 C22orf15Q8WYQ4 148 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 DUS3LQ96G46 650 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 CYP2S1Q96SQ9 504 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 OR51I1Q9H343 314 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 LRCH4O75427 683 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 NFYBP25208 207 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 HSD11B2P80365 405 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TRIM61Q5EBN2 209 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 HERVK_113Q902F9 699 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 CHRNA9Q9UGM1 479 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 EP300Q09472 2414 aaPredicted RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 OR2C1O95371 312 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TFAP2AP05549 437 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 CKMT1AP12532 417 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SYN1P17600 705 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 HNF4GQ14541 408 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 MRPL38Q96DV4 380 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SENP8Q96LD8 212 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TXLNGYQ9BZA5 131 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 KLRF1Q9NZS2 232 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 PCNX2A6NKB5 2137 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TREHO43280 583 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 MMP20O60882 483 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 RECQL4O94761 1208 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 ACY1Q03154 408 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 KDELC1Q6UW63 502 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SP8Q8IXZ3 490 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 OR6V1Q8N148 313 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 GGHQ92820 318 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 GLYATL1Q969I3 302 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SGCZQ96LD1 299 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 HS6ST2Q96MM7 605 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 HMX1Q9NP08 348 aaPredicted RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 PGAP2Q9UHJ9 254 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 RNF225M0QZC1 329 aaPredicted RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SLITRK3O94933 977 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 PTBP3O95758 552 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 BPIP17213 487 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SORDQ00796 357 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 MAP2K5Q13163 448 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.87□□□□□ -0.839e-10■■■□□ 15.9
SPTBN1-201ENST00000333896 ARHGAP11BQ3KRB8 267 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 VARS2Q5ST30 1063 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 PSRC1Q6PGN9 363 aaPredicted RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 USB1Q9BQ65 265 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 NIFKQ9BYG3 293 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SDHAF3Q9NRP4 125 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TCRBV3S1A0A5B6 114 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 EPHX2P34913 555 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF41P51814 821 aaPredicted RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 RPP30P78346 268 aaKnown RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 BEX3Q00994 111 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 CCNJQ5T5M9 372 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TMEM151AQ8N4L1 468 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 SPPL2BQ8TCT7 592 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 CSPG4P5Q96PW8 444 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 TMPRSS5Q9H3S3 457 aa9.87□□□□□ -0.83
SPTBN1-201ENST00000333896 RGS13O14921 159 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CD63P08962 238 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 IGFBP4P22692 258 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CAV2P51636 162 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 TNK1Q13470 666 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 LINGO4Q6UY18 593 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CMASQ8NFW8 434 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 NPRL2Q8WTW4 380 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 LCN9Q8WX39 176 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms