RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 HPNP05981 417 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 FREM3P0C091 2139 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 CT45A8P0DMV1 189 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 CT45A9P0DMV2 189 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 GABRA1P14867 456 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 ELAVL4P26378 380 aaKnown RBP15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 PTPN6P29350 595 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 ADH7P40394 386 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 WNT3P56703 355 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 CEBPEQ15744 281 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 GALNTL6Q49A17 601 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 CT45A2Q5DJT8 189 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 LARP4Q71RC2 724 aaKnown RBP eCLIP15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 WDR53Q7Z5U6 358 aaPredicted RBP15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 LURAP1LQ8IV03 231 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 ULK2Q8IYT8 1036 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 OR4N2Q8NGD1 307 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 ZBTB9Q96C00 473 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 EFHD2Q96C19 240 aaPredicted RBP15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 TMCO6Q96DC7 493 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 TSSK3Q96PN8 268 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 TRIM8Q9BZR9 551 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 UBQLN3Q9H347 655 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 GLIPR2Q9H4G4 154 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 Q9UFV3 132 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 EXO1Q9UQ84 846 aaKnown RBP15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 CCL27Q9Y4X3 112 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 DCHS2Q6V1P9 2916 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 CSMD1Q96PZ7 3565 aa15.56■□□□□ 0.08
HMGCLL1-202ENST00000308161 OR6C70A6NIJ9 312 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 SNPHO15079 494 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 NEFHP12036 1026 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 CREB1P16220 341 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 TCEA1P23193 301 aaKnown RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 PTGDSP41222 190 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 ZFP36L2P47974 494 aaKnown RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 CRYZQ08257 329 aaKnown RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 ARL13AQ5H913 290 aaPredicted RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 KANK2Q63ZY3 851 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 IKBIPQ70UQ0 350 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 FAM83FQ8NEG4 500 aaPredicted RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 TWIST2Q8WVJ9 160 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 ROPN1BQ9BZX4 212 aaPredicted RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 STMN4Q9H169 189 aaPredicted RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 TUBB1Q9H4B7 451 aa15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 ROPN1Q9HAT0 212 aaPredicted RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 EML4Q9HC35 981 aaKnown RBP15.55■□□□□ 0.08
HMGCLL1-202ENST00000308161 PDPK1O15530 556 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 TOXO94900 526 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 GPC1P35052 558 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 RFX3P48380 749 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 HSPB3Q12988 150 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 EFR3AQ14156 821 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 KIAA0040Q15053 153 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 KRT71Q3SY84 523 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 OR5M10Q6IEU7 315 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 WDR93Q6P2C0 686 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 Q6ZSR9 355 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 ZNF551Q7Z340 670 aaPredicted RBP15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 SZRD1Q7Z422 152 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 ZNF295-AS1Q8N0V1 137 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 OR14L1PQ8NHC6 308 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 CAVIN3Q969G5 261 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 CIDECQ96AQ7 238 aaPredicted RBP15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 SLC35A4Q96G79 324 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 AMDHD1Q96NU7 426 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 TIMP4Q99727 224 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 SPOCK3Q9BQ16 436 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 UGT2B28Q9BY64 529 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 EQTNQ9NQ60 294 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 NPDC1Q9NQX5 325 aaPredicted RBP15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 SH3BP4Q9P0V3 963 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 BAIAP2L1Q9UHR4 511 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 WBP11Q9Y2W2 641 aaKnown RBP15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 TRAF6Q9Y4K3 522 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 DNAJC15Q9Y5T4 150 aa15.54■□□□□ 0.08
HMGCLL1-202ENST00000308161 KDM4EB2RXH2 506 aaPredicted RBP15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 UPK1AO00322 258 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 PIP5K1BO14986 540 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 SCO2O43819 266 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 NPHS1O60500 1241 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 TSPAN2O60636 221 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 ABCB7O75027 752 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 HOXD4P09016 255 aaPredicted RBP15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 BMP7P18075 431 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 SDC1P18827 310 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 PRPH2P23942 346 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 GCKP35557 465 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 SNTA1Q13424 505 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 ACSF3Q4G176 576 aaPredicted RBP15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 RFTN2Q52LD8 501 aaPredicted RBP15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 DCST1Q5T197 706 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 TMEM81Q6P7N7 255 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 LIX1LQ8IVB5 337 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 WDSUB1Q8N9V3 476 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 ABTB1Q969K4 478 aaPredicted RBP15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 PPCDCQ96CD2 204 aa15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 METTL2AQ96IZ6 378 aaKnown RBP15.53■□□□□ 0.08
HMGCLL1-202ENST00000308161 CCT7Q99832 543 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms