RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 OIP5O43482 229 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 GBAP04062 536 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 RAB39AQ14964 217 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SPCS2Q15005 226 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 FAHD2BQ6P2I3 314 aaPredicted RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 MALSU1Q96EH3 234 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 FAHD2AQ96GK7 314 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 AP1S3Q96PC3 154 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TRPV4Q9HBA0 871 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 FAM118AQ9NWS6 357 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TRNAU1APQ9NX07 287 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 NLKQ9UBE8 527 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TNS1Q9HBL0 1735 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 IQCMA0A1B0GVH7 501 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR2B3O76000 313 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CD97P48960 835 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SUB1P53999 127 aaKnown RBP eCLIP3.82□□□□□ -1.8
USH2A-201ENST00000307340 TOR3AQ9H497 397 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZNF337Q9Y3M9 751 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ASXL3Q9C0F0 2248 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TDRD6O60522 2096 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 H3BNC9 293 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 I6L893 689 aaPredicted RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 RFPL2O75678 378 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 LALBAP00709 142 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TNFSF4P23510 183 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 GSK3BP49841 420 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TLE4Q04727 773 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CPZQ66K79 652 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 MRPL10Q7Z7H8 261 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 NRROSQ86YC3 692 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR8H3Q8N146 312 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZNF565Q8N9K5 539 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR2L3Q8NG85 312 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 INTS6Q9UL03 887 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 SARDHQ9UL12 918 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 HS3ST2Q9Y278 367 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 GALTP07902 379 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SPP1P10451 314 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 RAB1AP62820 205 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZNF595Q8IYB9 648 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TAB3Q8N5C8 712 aaPredicted RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 ACVR1CQ8NER5 493 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR1J2Q8NGS2 313 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ACOT11Q8WXI4 607 aaPredicted RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 FBXL8Q96CD0 374 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 PPM1MQ96MI6 270 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 PTCHD1Q96NR3 888 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 PRRG4Q9BZD6 226 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 BMI1P35226 326 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TAS2R39P59534 338 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SLC22A25Q6T423 547 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 PRSS55Q6UWB4 352 aaPredicted RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 RPS19BP1Q86WX3 136 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 FANK1Q8TC84 345 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SCGB1C1Q8TD33 95 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CD200R1Q8TD46 325 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR10A4Q9H209 315 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZCCHC4Q9H5U6 513 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CLEC4AQ9UMR7 237 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SIP14410 1827 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TCRBV3S1A0A5B6 114 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 DUX1O43812 170 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 IGF2P01344 180 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CHRNB4P30926 498 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 LCN6P62502 163 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CDC20Q12834 499 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CTBP1Q13363 440 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SPRYD7Q5W111 196 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 PRRC1Q96M27 445 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 KLHL15Q96M94 604 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 OR52A5Q9H2C5 316 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ZNF541Q9H0D2 1346 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 MT-ND1P03886 318 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 HNRNPLP14866 589 aaKnown RBP eCLIP3.82□□□□□ -1.8
USH2A-201ENST00000307340 NELFEP18615 380 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 FDXRP22570 491 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CTNNB1P35222 781 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 DPTQ07507 201 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CYBRD1Q53TN4 286 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 FAM74A1Q5RGS3 127 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 HTR3DQ70Z44 454 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 GPR149Q86SP6 731 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 ACER1Q8TDN7 264 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 MFSD3Q96ES6 412 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 TBATAQ96M53 351 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 PFDN5Q99471 154 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 PBX4Q9BYU1 374 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 METTL8Q9H825 291 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 DOCK3Q8IZD9 2030 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 A0A1B0GTW7 788 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 A0A1W2PRQ8 180 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SNRPGP15A8MWD9 76 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 A8MXE2 369 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 J3QRK9 145 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 LCMT2O60294 686 aaKnown RBP3.82□□□□□ -1.8
USH2A-201ENST00000307340 TK1P04183 234 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 SCG5P05408 212 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 RABGGTBP53611 331 aa3.82□□□□□ -1.8
USH2A-201ENST00000307340 CBFBQ13951 182 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms