RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TCTN3Q6NUS6 607 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 YIPF3Q9GZM5 350 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 SMIM31A0A1B0GVY4 71 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 FCMRO60667 390 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 CCNYL3P0C7X3 344 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 ACP2P11117 423 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 TUBA4AP68366 448 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 TOP3AQ13472 1001 aaPredicted RBP13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 PIN1Q13526 163 aaPredicted RBP13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 APOFQ13790 326 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 SHBQ15464 509 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 NADK2Q4G0N4 442 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 RBM48Q5RL73 367 aaKnown RBP13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 ZCCHC12Q6PEW1 402 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 RRM2BQ7LG56 351 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 BPIFB6Q8NFQ5 453 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 DPYSL5Q9BPU6 564 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 NUDT22Q9BRQ3 303 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 GMEB2Q9UKD1 530 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 AP3D1O14617 1153 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 STX11O75558 287 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 LGI1O95970 557 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 CT62P0C5K7 136 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 OR1D4P47884 311 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 GABRA4P48169 554 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 POU6F2P78424 691 aaPredicted RBP13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 BTG2P78543 158 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 CD47Q08722 323 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 KEAP1Q14145 624 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 ARHGAP11BQ3KRB8 267 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 DCST2Q5T1A1 773 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 PIK3R3Q92569 461 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 ZNF285Q96NJ3 590 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 DHCR7Q9UBM7 475 aaKnown RBP13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 HRO43593 1189 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 DYRK3O43781 588 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 GIMD1P0DJR0 217 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 MAOAP21397 527 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 POU1F1P28069 291 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 CSF2RBP32927 897 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 RPP38P78345 283 aaKnown RBP13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 DAB2P98082 770 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 C6orf141Q5SZD1 244 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 ZNF614Q8N883 585 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 OR4C15Q8NGM1 316 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 OR4C6Q8NH72 309 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 HDAC2Q92769 488 aaKnown RBP13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 PTCHD1Q96NR3 888 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 CCDC90BQ9GZT6 254 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 DUSP22Q9NRW4 184 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 RLIMQ9NVW2 624 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 TUBA8Q9NY65 449 aaPredicted RBP13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 YKT6O15498 198 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 UGT2B15P54855 530 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 HSD17B7P56937 341 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 FIGNL1Q6PIW4 674 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 WDR74Q6RFH5 385 aaPredicted RBP13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 LACC1Q8IV20 430 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 ARHGEF39Q8N4T4 335 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 EID2Q8N6I1 236 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 OR6T1Q8NGN1 323 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 CXorf21Q9HAI6 301 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 SCN3BQ9NY72 215 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 ATXN7L1Q9ULK2 861 aaPredicted RBP13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 SNX5Q9Y5X3 404 aa13.54□□□□□ -0.24
SHCBP1-201ENST00000303383 COL6A3P12111 3177 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 OR2W5A6NFC9 320 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 PTGES3LE9PB15 166 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 SIGLEC6O43699 453 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 ANGPTL1O95841 491 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 AK1P00568 194 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 IDH2P48735 452 aaKnown RBP13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 CLK3P49761 638 aaKnown RBP13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 GUSBP11Q6P575 273 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 RABEPKQ7Z6M1 372 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 ZNF605Q86T29 641 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 KMT5CQ86Y97 462 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 P3H2Q8IVL5 708 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 ZG16BQ96DA0 208 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 STACQ99469 402 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 SDF2Q99470 211 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 GTPBP2Q9BX10 602 aaKnown RBP13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 ARMC7Q9H6L4 198 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 RASSF1Q9NS23 344 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 FGF21Q9NSA1 209 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 IMPAD1Q9NX62 359 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 TRBV4-1A0A0J9YWV2 114 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 SYT5O00445 386 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 FAAHO00519 579 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 FRS3O43559 492 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 FOLR1P15328 257 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 RYKP34925 604 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 HMGA2P52926 109 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 SERTAD2Q14140 314 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 EIPR1Q53HC9 387 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 FHL5Q5TD97 284 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 HEPHL1Q6MZM0 1159 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 FRRS1Q6ZNA5 592 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 D2HGDHQ8N465 521 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms