RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 NPIPA7E9PJI5 369 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 NPIPA8P0DM63 369 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 MMP11P24347 488 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 MAT1AQ00266 395 aaKnown RBP21.63■■□□□ 1.05
RAB40B-201ENST00000269347 SPCS2Q15005 226 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 MAPK14Q16539 360 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 BCDIN3DQ7Z5W3 292 aaKnown RBP21.63■■□□□ 1.05
RAB40B-201ENST00000269347 RASSF5Q8WWW0 418 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 TRNT1Q96Q11 434 aaKnown RBP21.63■■□□□ 1.05
RAB40B-201ENST00000269347 PINK1Q9BXM7 581 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 ZNF556Q9HAH1 456 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 TAS2R16Q9NYV7 291 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 PSORS1C1Q9UIG5 152 aa21.63■■□□□ 1.05
RAB40B-201ENST00000269347 A0A0A6YYC8 382 aaPredicted RBP21.62■■□□□ 1.05
RAB40B-201ENST00000269347 I3L1I5 382 aaPredicted RBP21.62■■□□□ 1.05
RAB40B-201ENST00000269347 RGS10O43665 173 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 ASNA1O43681 348 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 ATXN8OSP0DMR3 200 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 PTNP21246 168 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 CSNK1EP49674 416 aaKnown RBP21.62■■□□□ 1.05
RAB40B-201ENST00000269347 OCA2Q04671 838 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 NFATC3Q12968 1075 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 ERV3-1Q14264 604 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 PRICKLE4Q2TBC4 344 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 FAM214AQ32MH5 1076 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 EXOSC6Q5RKV6 272 aaKnown RBP21.62■■□□□ 1.05
RAB40B-201ENST00000269347 NKAIN2Q5VXU1 208 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 C16orf62Q7Z3J2 963 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 MCATQ8IVS2 390 aaKnown RBP21.62■■□□□ 1.05
RAB40B-201ENST00000269347 CDX2Q99626 313 aaPredicted RBP21.62■■□□□ 1.05
RAB40B-201ENST00000269347 CCDC3Q9BQI4 270 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 SEMA4GQ9NTN9 838 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 FKBP14Q9NWM8 211 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 SCN3BQ9NY72 215 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 MAT2BQ9NZL9 334 aa21.62■■□□□ 1.05
RAB40B-201ENST00000269347 WARS2Q9UGM6 360 aaKnown RBP21.62■■□□□ 1.05
RAB40B-201ENST00000269347 TMEM184BQ9Y519 407 aaPredicted RBP21.62■■□□□ 1.05
RAB40B-201ENST00000269347 HRKO00198 91 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 FOXS1O43638 330 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 BCAS1O75363 584 aaPredicted RBP21.61■■□□□ 1.05
RAB40B-201ENST00000269347 UGT2B17O75795 530 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 TLX1P31314 330 aaPredicted RBP21.61■■□□□ 1.05
RAB40B-201ENST00000269347 FASLGP48023 281 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 TUBA3CQ13748 450 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 DGCR6Q14129 220 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 CTF1Q16619 201 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 IQCF1Q8N6M8 205 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 ARHGDIGQ99819 225 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 A0A1W2PRQ8 180 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 FAAHO00519 579 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 ADAP00813 363 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 CTSKP43235 329 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 TMBIM6P55061 237 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 TARDBPQ13148 414 aaKnown RBP eCLIP21.61■■□□□ 1.053e-7■■■■□ 24.8
RAB40B-201ENST00000269347 IQCHQ86VS3 1027 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 PHOX2BQ99453 314 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 UCK2Q9BZX2 261 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 MS4A12Q9NXJ0 267 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 HCN3Q9P1Z3 774 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 TMCC3Q9ULS5 477 aa21.61■■□□□ 1.05
RAB40B-201ENST00000269347 C19orf53Q9UNZ5 99 aaPredicted RBP21.61■■□□□ 1.05
RAB40B-201ENST00000269347 CPSF4LA6NMK7 179 aaKnown RBP21.6■■□□□ 1.05
RAB40B-201ENST00000269347 CHST10O43529 356 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 CDC123O75794 336 aaPredicted RBP21.6■■□□□ 1.05
RAB40B-201ENST00000269347 GPR75O95800 540 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 ATP1B1P05026 303 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 ALPPP05187 535 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 MYF5P13349 255 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 NT5EP21589 574 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 TGFBR1P36897 503 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 CAPZBP47756 277 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 AVPR1BP47901 424 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 GABRA4P48169 554 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 PRTGQ2VWP7 1150 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 PRSS48Q7RTY5 328 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 ZAR1Q86SH2 424 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 METTL27Q8N6F8 245 aaPredicted RBP21.6■■□□□ 1.05
RAB40B-201ENST00000269347 OR4K5Q8NGD3 323 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 PRRC1Q96M27 445 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 SDF2Q99470 211 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 COPS4Q9BT78 406 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 ETAA1Q9NY74 926 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 FBXL21Q9UKT6 434 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 CFAP54Q96N23 3096 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 WDR87Q6ZQQ6 2873 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 IGHV5-51A0A0C4DH38 117 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 STSP08842 583 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 OSMP13725 252 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 NUDT1P36639 197 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 MAGEA8P43361 318 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 RACK1P63244 317 aaKnown RBP21.6■■□□□ 1.05
RAB40B-201ENST00000269347 PLAURQ03405 335 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 BNIP3Q12983 259 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 ARMC6Q6NXE6 501 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 ZC3H14Q6PJT7 736 aaKnown RBP21.6■■□□□ 1.05
RAB40B-201ENST00000269347 P3H2Q8IVL5 708 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 OR52P1PQ8NH57 321 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 YIPF6Q96EC8 236 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 IL4I1Q96RQ9 567 aa21.6■■□□□ 1.05
RAB40B-201ENST00000269347 FNDC11Q9BVV2 318 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms