RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 HORMAD2Q8N7B1 307 aa4.45□□□□□ -1.7
RAP1B-201ENST00000250559 OR2A12Q8NGT7 310 aa4.45□□□□□ -1.7
RAP1B-201ENST00000250559 TMEM174Q8WUU8 243 aa4.45□□□□□ -1.7
RAP1B-201ENST00000250559 PRSS38A1L453 326 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 FAM183AA6NL82 134 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 TACR1P25103 407 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CDKN2CP42773 168 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 RPS15AP62244 130 aaKnown RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PLCXD2Q0VAA5 305 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SQSTM1Q13501 440 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PTGES3Q15185 160 aaKnown RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 RASGEF1AQ8N9B8 481 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 C1QTNF6Q9BXI9 259 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 DIABLOQ9NR28 239 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 DKKL1Q9UK85 242 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 C7orf72A4D263 438 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CAV3P56539 151 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ZNF630Q2M218 657 aaPredicted RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 LEXMQ3ZCV2 418 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ZNF404Q494X3 552 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CPXM2Q8N436 756 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 POGLUT1Q8NBL1 392 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 THOC3Q96J01 351 aaKnown RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 MGLLQ99685 303 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 MEIS3P1A6NDR6 274 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PCP4L1A6NKN8 68 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 LATS1O95835 1130 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 HTR1AP08908 422 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ECH1Q13011 328 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 UGT3A2Q3SY77 523 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 C6orf141Q5SZD1 244 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PDZD3Q86UT5 571 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 MMP21Q8N119 569 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SCML4Q8N228 414 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 MARVELD2Q8N4S9 558 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 NEIL3Q8TAT5 605 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ZNF480Q8WV37 535 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 NSMAFQ92636 917 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PEX13Q92968 403 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 TRIB3Q96RU7 358 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 DMRT3Q9NQL9 472 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 C14orf105Q9NVL8 296 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 RAD1O60671 282 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PIAS2O75928 621 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 RPS3P23396 243 aaKnown RBP eCLIP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PSMA6P60900 246 aaKnown RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CDK3Q00526 305 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 MICAQ29983 383 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 TMED4Q7Z7H5 227 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SPARTQ8N0X7 666 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ZDHHC5Q9C0B5 715 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 EXOSC1Q9Y3B2 195 aaKnown RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 GPR45Q9Y5Y3 372 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 RREB1Q92766 1687 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 C17orf105B2RV13 164 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 AOAHP28039 575 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PIK3CBP42338 1070 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SIRPAP78324 504 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CTBSQ01459 385 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CDK5R2Q13319 367 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 RCAN2Q14206 197 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SWI5Q1ZZU3 235 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 FAM26DQ5JW98 314 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 THSD4Q6ZMP0 1018 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 TRMT2BQ96GJ1 504 aaKnown RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 NPLQ9BXD5 320 aaPredicted RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 TP63Q9H3D4 680 aaPredicted RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SSC5DA1L4H1 1573 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 HSD17B1P14061 328 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 HTR1EP28566 365 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SFTPDP35247 375 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 AP3S2P59780 193 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ATXN7L3Q14CW9 347 aaPredicted RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SMN1Q16637 294 aaKnown RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 NHSL2Q5HYW2 709 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 IL20RBQ6UXL0 311 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ACOT4Q8N9L9 421 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 OR6N1Q8NGY5 312 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ARAP2Q8WZ64 1704 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SLC30A2Q9BRI3 323 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SDHAF3Q9NRP4 125 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 LAMA4Q16363 1823 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 MYH2Q9UKX2 1941 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 A0A1W2PQ72 361 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CCRL2O00421 344 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 NCR1O76036 304 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CER1O95813 267 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 GASTP01350 101 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PIM1P11309 404 aaPredicted RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 MTNR1AP48039 350 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 MLC1Q15049 377 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 LTB4RQ15722 352 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 SYPL1Q16563 259 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 HNRNPA1L2Q32P51 320 aaKnown RBP4.44□□□□□ -1.7
RAP1B-201ENST00000250559 CLEC1AQ8NC01 280 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 OR4K5Q8NGD3 323 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 DTD2Q96FN9 168 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 PDXPQ96GD0 296 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 FUNDC2Q9BWH2 189 aa4.44□□□□□ -1.7
RAP1B-201ENST00000250559 ASPNQ9BXN1 380 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms