RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 VRK2Q86Y07 508 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 FAR1Q8WVX9 515 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 DNASE2BQ8WZ79 361 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 RAB33BQ9H082 229 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 TIMMDC1Q9NPL8 285 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 MAT2BQ9NZL9 334 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 EPHA6Q9UF33 1036 aa21.75■■□□□ 1.07
MSX2-201ENST00000239243 WARS2Q9UGM6 360 aaKnown RBP21.75■■□□□ 1.07
MSX2-201ENST00000239243 TLCD2A6NGC4 264 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 SOX30O94993 753 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 AK1P00568 194 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 ACP2P11117 423 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 FAM53BQ14153 422 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 DEFB133Q30KQ1 61 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 GARNL3Q5VVW2 1013 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 WDR53Q7Z5U6 358 aaPredicted RBP21.74■■□□□ 1.07
MSX2-201ENST00000239243 HMGN2P46Q86SG4 172 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 MYDGFQ969H8 173 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 CHRNA10Q9GZZ6 450 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 PLCL2Q9UPR0 1127 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 RNH1P13489 461 aaKnown RBP21.74■■□□□ 1.07
MSX2-201ENST00000239243 SOX18P35713 384 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 MLLT3P42568 568 aaPredicted RBP21.74■■□□□ 1.07
MSX2-201ENST00000239243 TAS2R41P59536 307 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 TARDBPQ13148 414 aaKnown RBP eCLIP21.74■■□□□ 1.07
MSX2-201ENST00000239243 LARS2Q15031 903 aaKnown RBP21.74■■□□□ 1.07
MSX2-201ENST00000239243 EXOSC6Q5RKV6 272 aaKnown RBP21.74■■□□□ 1.07
MSX2-201ENST00000239243 PODNL1Q6PEZ8 512 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 ANKRD9Q96BM1 317 aaPredicted RBP21.74■■□□□ 1.07
MSX2-201ENST00000239243 ZNF285Q96NJ3 590 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 CD180Q99467 661 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 POLR2J3Q9H1A7 115 aaKnown RBP21.74■■□□□ 1.07
MSX2-201ENST00000239243 ANKRD19PQ9H560 264 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 LIN28AQ9H9Z2 209 aaKnown RBP21.74■■□□□ 1.07
MSX2-201ENST00000239243 ZNF226Q9NYT6 803 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 REV1Q9UBZ9 1251 aa21.74■■□□□ 1.07
MSX2-201ENST00000239243 TRIM64BA6NI03 449 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 FCMRO60667 390 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 GABRB1P18505 474 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 INAVAQ3KP66 663 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 WDR45BQ5MNZ6 344 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 TYW3Q6IPR3 259 aaKnown RBP21.73■■□□□ 1.07
MSX2-201ENST00000239243 CD300LDQ6UXZ3 194 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 AHSA2Q719I0 299 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 CTHRC1Q96CG8 243 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 ZDHHC12Q96GR4 267 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 MAN2C1Q9NTJ4 1040 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 PSORS1C1Q9UIG5 152 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 MKLN1Q9UL63 735 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 CEP192Q8TEP8 1941 aa21.73■■□□□ 1.07
MSX2-201ENST00000239243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 RHPN2P1A8MT19 583 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 COQ9O75208 318 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 PIAS2O75928 621 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 MT-ND2P03891 347 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 THBS1P07996 1170 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 AFF3P51826 1226 aaKnown RBP21.72■■□□□ 1.07
MSX2-201ENST00000239243 ZP2Q05996 745 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 EIPR1Q53HC9 387 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 TCTE1Q5JU00 501 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 UBALD2Q8IYN6 164 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 PMM1Q92871 262 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 SLC38A4Q969I6 547 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 ZG16BQ96DA0 208 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 SIGLEC11Q96RL6 698 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 SDF2Q99470 211 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 COPS4Q9BT78 406 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 ZNF350Q9GZX5 532 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 PDE7BQ9NP56 450 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 ZNF443Q9Y2A4 671 aaPredicted RBP21.72■■□□□ 1.07
MSX2-201ENST00000239243 PRUNE2Q8WUY3 3088 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 A0A0A6YYC8 382 aaPredicted RBP21.72■■□□□ 1.07
MSX2-201ENST00000239243 SH3D21A4FU49 640 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 CLCA1A8K7I4 914 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 I3L1I5 382 aaPredicted RBP21.72■■□□□ 1.07
MSX2-201ENST00000239243 AP3D1O14617 1153 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 OR10H2O60403 315 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 ZIC2O95409 532 aaPredicted RBP21.72■■□□□ 1.07
MSX2-201ENST00000239243 NSA2O95478 260 aaKnown RBP21.72■■□□□ 1.07
MSX2-201ENST00000239243 CCNYL3P0C7X3 344 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 CCNA2P20248 432 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 IFNGR2P38484 337 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 CSNK1EP49674 416 aaKnown RBP21.72■■□□□ 1.07
MSX2-201ENST00000239243 DUSP8Q13202 625 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 CCDC103Q8IW40 242 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 OR4K5Q8NGD3 323 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 OR6C4Q8NGE1 309 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 SOHLH2Q9NX45 425 aa21.72■■□□□ 1.07
MSX2-201ENST00000239243 KNL1Q8NG31 2342 aa21.71■■□□□ 1.07
MSX2-201ENST00000239243 STX11O75558 287 aa21.71■■□□□ 1.07
MSX2-201ENST00000239243 INMTO95050 263 aa21.71■■□□□ 1.07
MSX2-201ENST00000239243 ATE1O95260 518 aa21.71■■□□□ 1.07
MSX2-201ENST00000239243 POU1F1P28069 291 aa21.71■■□□□ 1.07
MSX2-201ENST00000239243 GP2P55259 537 aaKnown RBP21.71■■□□□ 1.07
MSX2-201ENST00000239243 RGS8P57771 180 aaPredicted RBP21.71■■□□□ 1.07
MSX2-201ENST00000239243 ALDH6A1Q02252 535 aaKnown RBP21.71■■□□□ 1.07
MSX2-201ENST00000239243 MGAT2Q10469 447 aa21.71■■□□□ 1.07
MSX2-201ENST00000239243 ST3GAL3Q11203 375 aa21.71■■□□□ 1.07
MSX2-201ENST00000239243 TRAM2Q15035 370 aa21.71■■□□□ 1.07
MSX2-201ENST00000239243 ZNF595Q8IYB9 648 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms