RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gm16506F7ANP4 213 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vmn2r46L7N282 809 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vmn2r44L7N2E1 861 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rundc3aO08576 446 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Klrb1cP27814 223 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 ThpoP40226 356 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rph3aP47708 681 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pydc3Q3V3Q4 588 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Opa3Q505D7 179 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gpbar1Q80SS6 329 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Q80Y39 304 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Dcaf12l2Q8BGW4 469 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tmem251Q8BH26 163 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ip6k3Q8BWD2 396 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Apoa5Q8C7G5 368 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 B3gnt7Q8K0J2 397 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr474Q8VFC9 310 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Taar1Q923Y8 332 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Prpf19Q99KP6 504 aaKnown RBP6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ampd2Q9DBT5 798 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 MecrQ9DCS3 373 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tp73Q9JJP2 631 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cdh17Q9R100 827 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 GghQ9Z0L8 317 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fbn2Q61555 2907 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mfsd13bA0A1L1SUA2 455 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm5938A2AEN9 163 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm5751A2AHC8 147 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rhox1B1APN4 224 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Spata6lB2RV46 347 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm20878L7N244 103 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tssk2O54863 358 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 NppaP05125 152 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 TP20293 436 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pxmp2P42925 194 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Abraxas2Q3TCJ1 415 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 VwceQ3U515 929 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gpalpp1Q69ZC8 346 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Shc4Q6S5L9 626 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tmem121Q80XA0 318 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Slitrk4Q810B8 837 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Q8BGA7 448 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 GskipQ8BGR8 139 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vmn1r85Q8VIB8 308 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Snrpb2Q9CQI7 225 aaKnown RBP6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nudt17Q9CWD3 296 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 NaxdQ9CZ42 343 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rnft1Q9DCN7 395 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Klhl1Q9JI74 751 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ak4Q9WUR9 223 aaKnown RBP6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Osbpl10S4R1M9 766 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Asxl3Q8C4A5 2259 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm6509A0A0J9YUV1 481 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 A0A286YDU1 74 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm14295A2BG91 834 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Otud3B1AZ99 396 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 P04213 122 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Slc2a2P14246 523 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 S100a1P56565 94 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gnb5P62881 395 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Traf6P70196 530 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Defb41Q30KP6 65 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pag1Q3U1F9 429 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Dtx3lQ3UIR3 748 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 DdiasQ6NZG4 898 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rpl35Q6ZWV7 123 aaKnown RBP6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 McubQ810S1 345 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mgat4bQ812F8 548 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 SvopQ8BFT9 548 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gprin3Q8BWS5 763 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm4922Q8C0N0 497 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr460Q8VF31 314 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr952Q8VFD7 314 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr1378Q8VGH0 315 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Acy3Q91XE4 318 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Slc35a5Q921R7 437 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tcam1Q99NB3 548 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ska1Q9CPV1 254 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ilf2Q9CXY6 390 aaKnown RBP6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr955Q9EQ97 314 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Hectd1Q69ZR2 2618 aaKnown RBP6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Shank1D3YZU1 2167 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ros1Q78DX7 2340 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Trav8n-2A0A075B633 112 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 1700023F06RikA2AB62 382 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zfp563B8JJZ9 448 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 A630023A22RikJ3QP60 199 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vmn2r52L7N2B2 852 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 RfngO09009 332 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 B3galt2O54905 422 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 PrkcdP28867 674 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Arhgap39P59281 1107 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 SirpaP97797 513 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pcdhga7Q6DD96 935 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zfp933Q6PEE4 468 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 EnkurQ6SP97 255 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Prox2Q8BII1 593 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ugt2b35Q8BJL9 529 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Smco1Q8CEZ1 214 aa6.49□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ints14Q8R3P6 515 aa6.49□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms