RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gm5141A0A0J9YUW3 581 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Rhox2bA2A447 191 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Rhox2cA2AWL9 191 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 4930595D18RikD3Z642 64 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Ltb4rO88855 351 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 C9P06683 548 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Apoa2P09813 102 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Hoxb13P70321 286 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 PfplQ5RKV8 702 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Ppp3r1Q63810 170 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Q8BHG2 160 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Plekhm3Q8BM47 761 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Fbxw14Q8C2Y5 466 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Olfr1090Q8VGA6 313 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Serpinb1bQ8VHP7 382 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Oosp1Q925U0 202 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Gnpda2Q9CRC9 276 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Q9CWU4 180 aaKnown RBP12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Mrto4Q9D0I8 239 aaKnown RBP12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Spry1Q9QXV9 313 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Nfkb2Q9WTK5 899 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Irs2P81122 1321 aa12.12□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Cela3aA2A9U8 283 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Tcp10cE9Q046 482 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Olfr288E9Q1P2 318 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Vmn2r8L7N472 848 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Pdlim3O70209 316 aaKnown RBP12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Cd28P31041 218 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 S100a13P97352 98 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Hhla1Q3TYV2 514 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Prss36Q5K2P8 849 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 CpmQ80V42 443 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Hcar1Q8C131 343 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Kcnmb1Q8CAE3 191 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 FevQ8QZW2 237 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Vmn1r185Q8R299 319 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Olfr572Q8VGZ3 318 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 TipinQ91WA1 278 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Maf1Q9D0U6 258 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Sec23bQ9D662 767 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Stra6lQ9DBN1 621 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Cacng3Q9JJV5 315 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Hipk2Q9QZR5 1196 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Coro1bQ9WUM3 484 aaKnown RBP12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Stk25Q9Z2W1 426 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Pcdh15Q99PJ1 1943 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Nup210lQ9D2F7 1881 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 1700028J19RikA0A0U1RP08 172 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Zfp978A2A7I1 335 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Serpina3jD3Z451 420 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Ffar3Q3UFD7 319 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Trp53i11Q4QQM4 189 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Hepacam2Q4VAH7 463 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Rbbp4Q60972 425 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Znf235Q61116 645 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 B430306N03RikQ6QX36 289 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Gm5346Q7M766 736 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Spag1Q80ZX8 901 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Fam109aQ8BH49 266 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Ndrg4Q8BTG7 352 aaKnown RBP12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Dnajc22Q8CHS2 339 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Nupl2Q8CIC2 420 aaKnown RBP12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Spp2Q8K1I3 203 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Olfr120Q8VFQ2 330 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 NoboxQ8VIH1 527 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 3300002I08RikQ9CXH3 147 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Ndufs4Q9CXZ1 175 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Dennd6bQ9D9V7 585 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Olfr705Q9EPF7 316 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Fbxo8Q9QZN3 319 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 4930595M18RikA2RRY9 829 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Ssxa1B1AUS7 101 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Zfp758E9QAA1 583 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Prdx4O08807 274 aaKnown RBP12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Rnf13O54965 381 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Foxq1O70220 400 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Psma3O70435 255 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 CryaaP24622 196 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Ctbp2P56546 445 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Ube2fbQ3UWQ3 185 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Q3V0E1 1183 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Vat1Q62465 406 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Gpr119Q7TQP3 335 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Slc34a3Q80SU6 601 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Smyd4Q8BTK5 799 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Trmt6Q8CE96 497 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Fbxo45Q8K3B1 286 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Olfr448Q8VES9 310 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Park7Q99LX0 189 aaKnown RBP12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Fam13cQ9DBR2 601 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Eif4hQ9WUK2 248 aaKnown RBP12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 BC034090A0A087WP46 1202 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 CatsperbA2RTF1 1109 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Alkal1J3QPP8 127 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Vmn2r111K7N674 857 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Hmga1P17095 107 aaKnown RBP12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 CrtamQ149L7 389 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 P4ha2Q60716 537 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Sntb2Q61235 520 aa12.11□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Eid2Q6X7S9 236 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms