RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 ZNF675Q8TD23 568 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 NUDT8Q8WV74 236 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 EFHD2Q96C19 240 aaPredicted RBP13.29□□□□□ -0.28
HDDC2-204ENST00000608295 PPCDCQ96CD2 204 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 OTUB1Q96FW1 271 aaPredicted RBP13.29□□□□□ -0.28
HDDC2-204ENST00000608295 CCT7Q99832 543 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 ZDHHC11Q9H8X9 412 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 ZFP64Q9NPA5 681 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 ALKBH4Q9NXW9 302 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 KLRF1Q9NZS2 232 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 SH3BP4Q9P0V3 963 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 PRODH2Q9UF12 536 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 MAPRE3Q9UPY8 281 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 CFL2Q9Y281 166 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 MEMO1Q9Y316 297 aa13.29□□□□□ -0.28
HDDC2-204ENST00000608295 CACNA1CQ13936 2221 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 FRG2CA6NGY1 282 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 C17orf51A8MQB3 221 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 CAPN14A8MX76 684 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 MYO1GB0I1T2 1018 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 TRAPPC6AO75865 159 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 ABCB1P08183 1280 aaPredicted RBP13.28□□□□□ -0.28
HDDC2-204ENST00000608295 MYZAPP0CAP1 466 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 ENDOUP21128 410 aaKnown RBP13.28□□□□□ -0.28
HDDC2-204ENST00000608295 IL12BP29460 328 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 MPIP34949 423 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 GSTM5P46439 218 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 MAN2A2P49641 1150 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 CDK9P50750 372 aaKnown RBP13.28□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.28□□□□□ -0.28
HDDC2-204ENST00000608295 UGT3A2Q3SY77 523 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 TMEM198Q66K66 360 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 ANGPTL8Q6UXH0 198 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 IKBIPQ70UQ0 350 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 GALNT10Q86SR1 603 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 SAMD14Q8IZD0 417 aaPredicted RBP13.28□□□□□ -0.28
HDDC2-204ENST00000608295 SLC34A3Q8N130 599 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
HDDC2-204ENST00000608295 ZNF781Q8N8C0 355 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 FNDC5Q8NAU1 212 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 FAM76AQ8TAV0 307 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDDC2-204ENST00000608295 TUBGCP3Q96CW5 907 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 AMDHD1Q96NU7 426 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 OSBPL11Q9BXB4 747 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 SIRT5Q9NXA8 310 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 CNIH4Q9P003 139 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 SPRR3Q9UBC9 169 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 B4GALT7Q9UBV7 327 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 OR10H1Q9Y4A9 318 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 MED12Q93074 2177 aa13.28□□□□□ -0.28
HDDC2-204ENST00000608295 C15orf38-AP3S2A0A0A6YYH1 394 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 TRGV5A0A0B4J1U4 118 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 PRAMEF25A6NGN4 478 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 ERLIN1O75477 346 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 SERPINE1P05121 402 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 BCKDHAP12694 445 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 PRPH2P23942 346 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 KRT20P35900 424 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 DCTP40126 519 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 PRKAG1P54619 331 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 PTGR1Q14914 329 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 ATP6AP1LQ52LC2 224 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 XKR7Q5GH72 579 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 PAOXQ6QHF9 649 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 TRILQ7L0X0 811 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 DND1Q8IYX4 353 aaKnown RBP13.27□□□□□ -0.29
HDDC2-204ENST00000608295 MARVELD2Q8N4S9 558 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 HGDQ93099 445 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 SDCCAG3Q96C92 435 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 VSTM2LQ96N03 204 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 GNRHR2Q96P88 292 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 ADOQ96SZ5 270 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 C20orf27Q9GZN8 174 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 REEP4Q9H6H4 257 aa13.27□□□□□ -0.29
HDDC2-204ENST00000608295 FAM90A27PA6NNH2 459 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 UPK1AO00322 258 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 ADAM10O14672 748 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 SCO2O43819 266 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 COQ9O75208 318 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 CT45A8P0DMV1 189 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 CT45A9P0DMV2 189 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 CASP3P42574 277 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 PPICP45877 212 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 ABCE1P61221 599 aaKnown RBP13.26□□□□□ -0.29
HDDC2-204ENST00000608295 STX5Q13190 355 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 SLC10A1Q14973 349 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 CEBPEQ15744 281 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 CT45A2Q5DJT8 189 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 EMC4Q5J8M3 183 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 HHATQ5VTY9 493 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 MTFR2Q6P444 385 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 BNC2Q6ZN30 1099 aaPredicted RBP13.26□□□□□ -0.29
HDDC2-204ENST00000608295 LARP4Q71RC2 724 aaKnown RBP eCLIP13.26□□□□□ -0.296e-9■■□□□ 13.2
HDDC2-204ENST00000608295 ZNF808Q8N4W9 903 aaPredicted RBP13.26□□□□□ -0.29
HDDC2-204ENST00000608295 KRTCAP2Q8N6L1 136 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 C17orf47Q8NEP4 570 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 OR7A2PQ8NGA2 310 aa13.26□□□□□ -0.29
HDDC2-204ENST00000608295 HSPBAP1Q96EW2 488 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms