RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SELENOMQ8WWX9 145 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 GTF3AQ92664 365 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZG16BQ96DA0 208 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM120BQ96EK7 910 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MRPS24Q96EL2 167 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 OTUB1Q96FW1 271 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZDHHC12Q96GR4 267 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MASTLQ96GX5 879 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ITCHQ96J02 903 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 KCTD7Q96MP8 289 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 C8orf37Q96NL8 207 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 NECTIN4Q96NY8 510 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM193BQ96PV7 902 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PDCD2LQ9BRP1 358 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 THUMPD3Q9BV44 507 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 KATNB1Q9BVA0 655 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 GSDMCQ9BYG8 508 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MAGEB5Q9BZ81 275 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 SEMA4CQ9C0C4 833 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TGIF2Q9GZN2 237 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 KATNBL1Q9H079 304 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ALX4Q9H161 411 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TTYH1Q9H313 450 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 DPAGT1Q9H3H5 408 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 FZD8Q9H461 694 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CLMPQ9H6B4 373 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ALG9Q9H6U8 611 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TDRD3Q9H7E2 651 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 GLOD4Q9HC38 313 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 FGF20Q9NP95 211 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 NANSQ9NR45 359 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CYSLTR2Q9NS75 346 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 SNTG1Q9NSN8 517 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 NRBP2Q9NSY0 501 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 UFSP2Q9NUQ7 469 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 OSER1Q9NX31 292 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 THUMPD1Q9NXG2 353 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MS4A12Q9NXJ0 267 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 GPR83Q9NYM4 423 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 COQ3Q9NZJ6 369 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MED11Q9P086 117 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 HCN3Q9P1Z3 774 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 AASSQ9UDR5 926 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 MLXQ9UH92 298 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 DPP7Q9UHL4 492 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 BTNL2Q9UIR0 455 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF225Q9UK10 706 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 UTS2RQ9UKP6 389 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 TSPAN16Q9UKR8 245 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 OGDHLQ9ULD0 1010 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CBLCQ9ULV8 474 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PLCL2Q9UPR0 1127 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 ENTPD4Q9Y227 616 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 RPL36Q9Y3U8 105 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CFAP20Q9Y6A4 193 aaKnown RBP3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 CLCA3PQ9Y6N3 262 aa3.84□□□□□ -1.79
HMGB1P50-201ENST00000605814 PDCD11Q14690 1871 aaKnown RBP3.84□□□□□ -1.8
HMGB1P50-201ENST00000605814 DENND4AQ7Z401 1863 aa3.84□□□□□ -1.8
HMGB1P50-201ENST00000605814 MYLKQ15746 1914 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TRAV20A0A0B4J274 112 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TEX13CA0A0J9YWL9 993 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 LOC390937A0A1W2PQ73 354 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RAB19A4D1S5 217 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 MTMR11A4FU01 709 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ANKRD61A6NGH8 418 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 EFCAB7A8K855 629 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 C2orf74A8MZ97 194 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SMLR1H3BR10 107 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CACNB4O00305 520 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 UBE2CO00762 179 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PHYHO14832 338 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CTDSPLO15194 276 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GSTZ1O43708 216 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 NARSO43776 548 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GALR3O60755 368 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TMEM127O75204 238 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RGS11O94810 467 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CCNB2O95067 398 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 KCNK5O95279 499 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SIX3O95343 332 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 NFATC1O95644 943 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GLP2RO95838 553 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 MT-CO1P00395 513 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 EGFP01133 1207 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 VIPP01282 170 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TCRBP04435 133 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 IL5P05113 134 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 LPLP06858 475 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 FHP07954 510 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ACAA1P09110 424 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 FBP1P09467 338 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GIPP09681 153 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 C1SP09871 688 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRPS2P11908 318 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GABRA1P14867 456 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 JUPP14923 745 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CPN1P15169 458 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ATF3P18847 181 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 OGNP20774 298 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 NFYAP23511 347 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms