RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 AKTIPQ9H8T0 292 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 WDR41Q9HAD4 459 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 RASSF1Q9NS23 344 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 CCM2LQ9NUG4 571 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 TUBA8Q9NY65 449 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF629Q9UEG4 869 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 ADAM30Q9UKF2 790 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF490Q9ULM2 529 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-226ENST00000591534 RNF112Q9ULX5 631 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 FAM215AQ9Y5M1 114 aa8.68□□□□□ -1.02
BRCA1-226ENST00000591534 A0A0G2JMM0 328 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 GOLGA8QA0A0J9YX86 632 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 A0A1W2PPB8 328 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 A0A1W2PRS3 328 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 HMX2A2RU54 273 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 GOLGA8OA6NCC3 632 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 GMNCA6NCL1 334 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 OR6C76A6NM76 312 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 KIR3DP1A8MWS1 328 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 B2RBV5 119 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 TMEM114B3SHH9 223 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 GOLGA8NF8WBI6 632 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 TAPBPO15533 448 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 OR10H2O60403 315 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 PRAMEF4O60810 478 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 TRIM13O60858 407 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 SHOX2O60902 331 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 SCELO95171 688 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 SNX4O95219 450 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 SLC35E2BP0CK96 405 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 PCNAP12004 261 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 CD1DP15813 335 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 ALOX15P16050 662 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 KLK2P20151 261 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 ATP5F1P24539 256 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 PIGAP37287 484 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 CASP2P42575 452 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 HSPA7P48741 367 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 TMED10P49755 219 aaKnown RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 ASCL1P50553 236 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 DNAJB13P59910 316 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 IRX1P78414 480 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 GALNT1Q10472 559 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 CHIT1Q13231 466 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 SLAMF1Q13291 335 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 CACNA1CQ13936 2221 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF791Q3KP31 576 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 PRAMEF9Q5VWM5 478 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 LIPMQ5VYY2 423 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 HLA-DQA1Q5Y7H0 255 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 OR4C11Q6IEV9 310 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 RNF111Q6ZNA4 994 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 SH2D5Q6ZV89 423 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 GPR180Q86V85 440 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 LACC1Q8IV20 430 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 WDR75Q8IWA0 830 aaKnown RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 ULK2Q8IYT8 1036 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 ST13P4Q8IZP2 240 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 ANKRD42Q8N9B4 389 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 PDPRQ8NCN5 879 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 NEIL3Q8TAT5 605 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF721Q8TF20 911 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 CKAP2Q8WWK9 683 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 RNASE6Q93091 150 aaKnown RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 RGMAQ96B86 450 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 REPS1Q96D71 796 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 JSRP1Q96MG2 331 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 MAPKAP1Q9BPZ7 522 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 TMEM79Q9BSE2 394 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 DOHHQ9BU89 302 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 CD244Q9BZW8 370 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 MANSC1Q9H8J5 431 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 THAP1Q9NVV9 213 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 PTBP2Q9UKA9 531 aaKnown RBP8.67□□□□□ -1.02
BRCA1-226ENST00000591534 PCDHB10Q9UN67 800 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 LIPGQ9Y5X9 500 aa8.67□□□□□ -1.02
BRCA1-226ENST00000591534 MTORP42345 2549 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 GTF3C1Q12789 2109 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 C15orf38-AP3S2A0A0A6YYH1 394 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 MYOCOSA0A1B0GUC4 107 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 A0A1W2PPM1 405 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 A6NNC1 897 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 STX16-NPEPL1H3BU86 382 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 STX16O14662 325 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 PLIN3O60664 434 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 KERAO60938 352 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 TGDSO95455 350 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ETHE1O95571 254 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 EPPINO95925 133 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 TGFB1P01137 390 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 IGKV3-11P04433 115 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 SERPINE1P05121 402 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 DHRS4L1P0CG22 281 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 BMP5P22003 454 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 PTX3P26022 381 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 NOS3P29474 1203 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 LSP1P33241 339 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 TIMP3P35625 211 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 PIK3CBP42338 1070 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 DLX5P56178 289 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms