RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 HOXD4P09016 255 aaPredicted RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 SDC1P18827 310 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 SOX18P35713 384 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 CASP3P42574 277 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 MAGEA5P43359 124 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 MASP1P48740 699 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 PSMD4P55036 377 aaKnown RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 MANFP55145 182 aaKnown RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 ABCE1P61221 599 aaKnown RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 EFR3AQ14156 821 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 CHI3L2Q15782 390 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 XKR7Q5GH72 579 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 BEND6Q5SZJ8 279 aaPredicted RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 PRAMEF20Q5VT98 475 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 HHATQ5VTY9 493 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 TRILQ7L0X0 811 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 MRGPRGQ86SM5 289 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 OR2L13Q8N349 312 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 CEP70Q8NHQ1 597 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 AGR3Q8TD06 166 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 OMA1Q96E52 524 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 ELP4Q96EB1 424 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 CCDC120Q96HB5 630 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 TMEM41AQ96HV5 264 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 EGLN2Q96KS0 407 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 JSRP1Q96MG2 331 aaPredicted RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 VSTM2LQ96N03 204 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 COL21A1Q96P44 957 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 TSSK3Q96PN8 268 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 GLIPR2Q9H4G4 154 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 METTL7AQ9H8H3 244 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 C3orf14Q9HBI5 128 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 ACSS1Q9NUB1 689 aaPredicted RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 ATAD3AQ9NVI7 634 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 DDX18Q9NVP1 670 aaKnown RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 SH3BP4Q9P0V3 963 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 SH3BGRL2Q9UJC5 107 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 TINAGQ9UJW2 476 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 EXO1Q9UQ84 846 aaKnown RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 EIF3LQ9Y262 564 aaKnown RBP11.17□□□□□ -0.62
CTDP1-206ENST00000590635 DTX4Q9Y2E6 619 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 PCDHGB3Q9Y5G1 929 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 PTGDR2Q9Y5Y4 395 aa11.17□□□□□ -0.62
CTDP1-206ENST00000590635 TRGV5A0A0B4J1U4 118 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 A0A0G2JMM0 328 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 ATP6AP2A0A1C7CYW4 349 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 A0A1W2PPB8 328 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 A0A1W2PRS3 328 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 FIGNL2A6NMB9 653 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 KIR3DP1A8MWS1 328 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 TMEM233B4DJY2 109 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 PEX11AO75192 247 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 REM1O75628 298 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 ATP6AP2O75787 350 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 SOX30O94993 753 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 RNF224P0DH78 156 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 CT45A8P0DMV1 189 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 CT45A9P0DMV2 189 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 BCKDHAP12694 445 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 TACR1P25103 407 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 IL12BP29460 328 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 GPC1P35052 558 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 HPCAL1P37235 193 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 SLC1A6P48664 564 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 MAN2A2P49641 1150 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 RPL14P50914 215 aaKnown RBP11.16□□□□□ -0.62
CTDP1-206ENST00000590635 PNLIPRP2P54317 469 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 HSF1Q00613 529 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 DUSP8Q13202 625 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 STX3Q13277 289 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 PDE7AQ13946 482 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 MLC1Q15049 377 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 SF3B4Q15427 424 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTDP1-206ENST00000590635 VPS26BQ4G0F5 336 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 CYP27C1Q4G0S4 372 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 CT45A2Q5DJT8 189 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 C6orf136Q5SQH8 315 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 TMEM64Q6YI46 380 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 CHERPQ8IWX8 916 aaKnown RBP11.16□□□□□ -0.62
CTDP1-206ENST00000590635 TRIM42Q8IWZ5 723 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 LRRC34Q8IZ02 419 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 LIX1Q8N485 282 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 FNDC5Q8NAU1 212 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 OR7G2Q8NG99 324 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 GFM2Q969S9 779 aaKnown RBP11.16□□□□□ -0.62
CTDP1-206ENST00000590635 TUBGCP3Q96CW5 907 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 SLC35A4Q96G79 324 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 RILPQ96NA2 401 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 RUBCNLQ9H714 662 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 EXO5Q9H790 373 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 ZNF703Q9H7S9 590 aaPredicted RBP11.16□□□□□ -0.62
CTDP1-206ENST00000590635 FOLH1BQ9HBA9 442 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 PROK2Q9HC23 129 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 HHATLQ9HCP6 504 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 COQ3Q9NZJ6 369 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 OR10H1Q9Y4A9 318 aa11.16□□□□□ -0.62
CTDP1-206ENST00000590635 KLF2Q9Y5W3 355 aaPredicted RBP11.16□□□□□ -0.62
CTDP1-206ENST00000590635 USP9XQ93008 2570 aaPredicted RBP11.15□□□□□ -0.62
CTDP1-206ENST00000590635 A1L4Q6 167 aa11.15□□□□□ -0.62
CTDP1-206ENST00000590635 FAM47E-STBD1D6RA91 191 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms