RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ATP5F1P24539 256 aaPredicted RBP10.19□□□□□ -0.78
CCDC47-206ENST00000584112 GCAP28676 217 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 HMOX2P30519 316 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 GALNT1Q10472 559 aaPredicted RBP10.19□□□□□ -0.78
CCDC47-206ENST00000584112 ZNF678Q5SXM1 525 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 GPRIN3Q6ZVF9 776 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 LIX1Q8N485 282 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 RPRMLQ8N4K4 120 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 CDYL2Q8N8U2 506 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 OR10Q1Q8NGQ4 319 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 UCN3Q969E3 161 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 KLHL29Q96CT2 875 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 JSRP1Q96MG2 331 aaPredicted RBP10.19□□□□□ -0.78
CCDC47-206ENST00000584112 TMEM237Q96Q45 408 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 PROK2Q9HC23 129 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 BEX4Q9NWD9 120 aaPredicted RBP10.19□□□□□ -0.78
CCDC47-206ENST00000584112 TMEM216Q9P0N5 145 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 PSMC3IPQ9P2W1 217 aaPredicted RBP10.19□□□□□ -0.78
CCDC47-206ENST00000584112 CES1P1Q9UKY3 287 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 PCDHGB3Q9Y5G1 929 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 ZNF780BQ9Y6R6 833 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 BIRC6Q9NR09 4857 aa10.19□□□□□ -0.78
CCDC47-206ENST00000584112 KIAA1549Q9HCM3 1950 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 LRRC3CA6NJW4 275 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 A6NNC1 897 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 MANBAO00462 879 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 PPP6CO00743 305 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 DLX3O60479 287 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 TRIM3O75382 744 aaPredicted RBP10.18□□□□□ -0.78
CCDC47-206ENST00000584112 ULK1O75385 1050 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 SNX4O95219 450 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 ESRRBO95718 433 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 CT62P0C5K7 136 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 RHOXF2BP0C7M4 288 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 RFPL3SP0C7P2 107 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 NAGAP17050 411 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 GDF1P27539 372 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 ZFP36L2P47974 494 aaKnown RBP10.18□□□□□ -0.78
CCDC47-206ENST00000584112 MASP1P48740 699 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 ALDH9A1P49189 494 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 PRKAA2P54646 552 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 PKNOX1P55347 436 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 FBXW4P57775 412 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 MAP4K2Q12851 820 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 LCP2Q13094 533 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 SLC29A2Q14542 456 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 PRICKLE4Q2TBC4 344 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 UNC50Q53HI1 259 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 SPIN4Q56A73 249 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 C1orf185Q5T7R7 199 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 PACS2Q86VP3 889 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 HIPK1Q86Z02 1210 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 SAMD14Q8IZD0 417 aaPredicted RBP10.18□□□□□ -0.78
CCDC47-206ENST00000584112 CLYBLQ8N0X4 340 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 C1orf52Q8N6N3 182 aaKnown RBP10.18□□□□□ -0.78
CCDC47-206ENST00000584112 GBP7Q8N8V2 638 aaPredicted RBP10.18□□□□□ -0.78
CCDC47-206ENST00000584112 NEIL3Q8TAT5 605 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 METTL6Q8TCB7 284 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 SPPL2AQ8TCT8 520 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 ADIPOR1Q96A54 375 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 TM4SF18Q96CE8 201 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 CCDC126Q96EE4 140 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 L3HYPDHQ96EM0 354 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 RILPQ96NA2 401 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 RHOXF2Q9BQY4 288 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 TTYH2Q9BSA4 534 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 BRINP2Q9C0B6 783 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 SLC24A3Q9HC58 644 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 CRIM1Q9NZV1 1036 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 DCDC2Q9UHG0 476 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 BCAP29Q9UHQ4 241 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 MCM8Q9UJA3 840 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 ZNF225Q9UK10 706 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 FAM215AQ9Y5M1 114 aa10.18□□□□□ -0.78
CCDC47-206ENST00000584112 NUP214P35658 2090 aaPredicted RBP10.18□□□□□ -0.78
CCDC47-206ENST00000584112 GNG14A0A1W2PPG7 69 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 GOLGA8RI6L899 631 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 ACOX3O15254 700 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 PCDH7O60245 1069 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 LRATO95237 230 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 ENO1P06733 434 aaKnown RBP10.17□□□□□ -0.78
CCDC47-206ENST00000584112 GLI4P10075 376 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 ENDOUP21128 410 aaKnown RBP10.17□□□□□ -0.78
CCDC47-206ENST00000584112 S1PR1P21453 382 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 GPX3P22352 226 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 ABCD3P28288 659 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 FEN1P39748 380 aaKnown RBP10.17□□□□□ -0.78
CCDC47-206ENST00000584112 GSTM5P46439 218 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 NAA20P61599 178 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 ACSM2AQ08AH3 577 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 SF3B4Q15427 424 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC47-206ENST00000584112 ACSM2BQ68CK6 577 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 TMEM64Q6YI46 380 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 YTHDF3Q7Z739 585 aaKnown RBP10.17□□□□□ -0.78
CCDC47-206ENST00000584112 HSPBAP1Q96EW2 488 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 HBEGFQ99075 208 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 ANGPTL4Q9BY76 406 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 TXLNGYQ9BZA5 131 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 SHCBP1LQ9BZQ2 653 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 NXF5Q9H1B4 397 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms