RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SOX18P35713 384 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 CASP3P42574 277 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 KRTAP10-9P60411 292 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 SLC25A35Q3KQZ1 300 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 LIX1Q8N485 282 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 CDYL2Q8N8U2 506 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 GBP7Q8N8V2 638 aaPredicted RBP19.16■□□□□ 0.66
CCDC42-203ENST00000581598 KLHL29Q96CT2 875 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 HSPBAP1Q96EW2 488 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 CNRIP1Q96F85 164 aaPredicted RBP19.16■□□□□ 0.66
CCDC42-203ENST00000581598 TMEM41AQ96HV5 264 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 ZNF681Q96N22 645 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 RILPQ96NA2 401 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 TMEM237Q96Q45 408 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 NXF5Q9H1B4 397 aaKnown RBP19.16■□□□□ 0.66
CCDC42-203ENST00000581598 KCNN3Q9UGI6 736 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 MCM8Q9UJA3 840 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 DTX4Q9Y2E6 619 aa19.16■□□□□ 0.66
CCDC42-203ENST00000581598 ANKRD17O75179 2603 aaKnown RBP19.15■□□□□ 0.66
CCDC42-203ENST00000581598 ACOX3O15254 700 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 ERAL1O75616 437 aaKnown RBP19.15■□□□□ 0.66
CCDC42-203ENST00000581598 ABCB1P08183 1280 aaPredicted RBP19.15■□□□□ 0.66
CCDC42-203ENST00000581598 FEN1P39748 380 aaKnown RBP19.15■□□□□ 0.66
CCDC42-203ENST00000581598 ADH7P40394 386 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 CDK9P50750 372 aaKnown RBP19.15■□□□□ 0.66
CCDC42-203ENST00000581598 DCAF7P61962 342 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 FNDC7Q5VTL7 733 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 FAM111BQ6SJ93 734 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 GPRIN3Q6ZVF9 776 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 PACS2Q86VP3 889 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 ULK2Q8IYT8 1036 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 CLYBLQ8N0X4 340 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 MMP21Q8N119 569 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 RAB3IL1Q8TBN0 382 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 CKAP2Q8WWK9 683 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 GATA5Q9BWX5 397 aaPredicted RBP19.15■□□□□ 0.66
CCDC42-203ENST00000581598 BRINP2Q9C0B6 783 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 C15orf41Q9Y2V0 281 aa19.15■□□□□ 0.66
CCDC42-203ENST00000581598 SERTM1A2A2V5 107 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 WDR91A4D1P6 747 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 AHRRA9YTQ3 701 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 ULK1O75385 1050 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 PPM1BO75688 479 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 CBX7O95931 251 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 ENO1P06733 434 aaKnown RBP19.14■□□□□ 0.65
CCDC42-203ENST00000581598 DRD2P14416 443 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 MDH1P40925 334 aaKnown RBP19.14■□□□□ 0.65
CCDC42-203ENST00000581598 PKNOX1P55347 436 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 NAA20P61599 178 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 CRYZQ08257 329 aaKnown RBP19.14■□□□□ 0.65
CCDC42-203ENST00000581598 DUSP8Q13202 625 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 NHSL2Q5HYW2 709 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 BICRALQ6AI39 1079 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 NUP54Q7Z3B4 507 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 TRIM42Q8IWZ5 723 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 ZNF675Q8TD23 568 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 ERP27Q96DN0 273 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 LCORQ96JN0 433 aaPredicted RBP19.14■□□□□ 0.65
CCDC42-203ENST00000581598 HBEGFQ99075 208 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 PRODH2Q9UF12 536 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 ZNF780BQ9Y6R6 833 aa19.14■□□□□ 0.65
CCDC42-203ENST00000581598 AKAP9Q99996 3911 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 TO15178 435 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 SERPINE1P05121 402 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 BGNP21810 368 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 PPICP45877 212 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 MASP1P48740 699 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 TRPC1P48995 793 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 NAGLUP54802 743 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 DUSP2Q05923 314 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 LCP2Q13094 533 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 SNTA1Q13424 505 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 CHI3L2Q15782 390 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 SPIN4Q56A73 249 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 TCHHL1Q5QJ38 904 aaPredicted RBP19.13■□□□□ 0.65
CCDC42-203ENST00000581598 CES4AQ5XG92 561 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 TIGD3Q6B0B8 471 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 LIX1LQ8IVB5 337 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 PM20D2Q8IYS1 436 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 PRR22Q8IZ63 422 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 SAMD14Q8IZD0 417 aaPredicted RBP19.13■□□□□ 0.65
CCDC42-203ENST00000581598 METTL6Q8TCB7 284 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 HGDQ93099 445 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 C11orf24Q96F05 449 aaPredicted RBP19.13■□□□□ 0.65
CCDC42-203ENST00000581598 ITPAQ9BY32 194 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 SHCBP1LQ9BZQ2 653 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 PRDM14Q9GZV8 571 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 CCDC134Q9H6E4 229 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 SIRT5Q9NXA8 310 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 ALKBH4Q9NXW9 302 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 HEY2Q9UBP5 337 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 BCAP29Q9UHQ4 241 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 UTS2RQ9UKP6 389 aa19.13■□□□□ 0.65
CCDC42-203ENST00000581598 TACC2O95359 2948 aa19.12■□□□□ 0.65
CCDC42-203ENST00000581598 C15orf38-AP3S2A0A0A6YYH1 394 aa19.12■□□□□ 0.65
CCDC42-203ENST00000581598 HSPB2A8KAH6 182 aa19.12■□□□□ 0.65
CCDC42-203ENST00000581598 KLF11O14901 512 aa19.12■□□□□ 0.65
CCDC42-203ENST00000581598 NPHS1O60500 1241 aa19.12■□□□□ 0.65
CCDC42-203ENST00000581598 BCAS2O75934 225 aaPredicted RBP19.12■□□□□ 0.65
CCDC42-203ENST00000581598 EPPINO95925 133 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms