RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 C19orf53Q9UNZ5 99 aaPredicted RBP21.6■■□□□ 1.05
SNF8-217ENST00000576353 EIF3LQ9Y262 564 aaKnown RBP21.6■■□□□ 1.05
SNF8-217ENST00000576353 HIVEP3Q5T1R4 2406 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 CDC40O60508 579 aaKnown RBP eCLIP21.59■■□□□ 1.05
SNF8-217ENST00000576353 FLNBO75369 2602 aaKnown RBP21.59■■□□□ 1.05
SNF8-217ENST00000576353 SNX4O95219 450 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 ABOP16442 354 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 CA7P43166 264 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 HSF1Q00613 529 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 EMX2Q04743 252 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 Q6ZPB1 254 aaPredicted RBP21.59■■□□□ 1.05
SNF8-217ENST00000576353 FJX1Q86VR8 437 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 TRIM42Q8IWZ5 723 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 SLC34A3Q8N130 599 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 OR2L13Q8N349 312 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 FAM109AQ8N4B1 249 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 RAB3IL1Q8TBN0 382 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 DOHHQ9BU89 302 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 C1orf50Q9BV19 199 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 DEFB127Q9H1M4 99 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 ZDHHC11Q9H8X9 412 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 FOLH1BQ9HBA9 442 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 ZFP64Q9NPA5 681 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 ACSS1Q9NUB1 689 aaPredicted RBP21.59■■□□□ 1.05
SNF8-217ENST00000576353 ATP6V1HQ9UI12 483 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 ZGRF1Q86YA3 2104 aa21.59■■□□□ 1.05
SNF8-217ENST00000576353 CT45A8P0DMV1 189 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 CT45A9P0DMV2 189 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 MANFP55145 182 aaKnown RBP21.58■■□□□ 1.05
SNF8-217ENST00000576353 CT45A2Q5DJT8 189 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 TMEM198Q66K66 360 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 ATG16L1Q676U5 607 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 ARHGAP11AQ6P4F7 1023 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 ZNF551Q7Z340 670 aaPredicted RBP21.58■■□□□ 1.05
SNF8-217ENST00000576353 HDXQ7Z353 690 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 TMEM251Q8N6I4 163 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 CIDECQ96AQ7 238 aaPredicted RBP21.58■■□□□ 1.05
SNF8-217ENST00000576353 ANGPTL4Q9BY76 406 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 PROK2Q9HC23 129 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 PLSCR2Q9NRY7 297 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 THAP1Q9NVV9 213 aa21.58■■□□□ 1.05
SNF8-217ENST00000576353 CROCCQ5TZA2 2017 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 A0A1B0GTH9 108 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 UPK1AO00322 258 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 CCL21O00585 134 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 SCAMP2O15127 329 aaKnown RBP21.57■■□□□ 1.04
SNF8-217ENST00000576353 PDE9AO76083 593 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 GPC1P35052 558 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 PTGS2P35354 604 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 CASP3P42574 277 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 FRKP42685 505 aaPredicted RBP21.57■■□□□ 1.04
SNF8-217ENST00000576353 CORO7P57737 925 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 HSPB3Q12988 150 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 SLC10A1Q14973 349 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 ZNF385BQ569K4 471 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 MTFR2Q6P444 385 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 PACS2Q86VP3 889 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 NATD1Q8N6N6 113 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 PRPF18Q99633 342 aaKnown RBP21.57■■□□□ 1.04
SNF8-217ENST00000576353 NOP53Q9NZM5 478 aaKnown RBP21.57■■□□□ 1.04
SNF8-217ENST00000576353 SUCOQ9UBS9 1254 aaKnown RBP21.57■■□□□ 1.04
SNF8-217ENST00000576353 B4GALT7Q9UBV7 327 aa21.57■■□□□ 1.04
SNF8-217ENST00000576353 ASH1LQ9NR48 2969 aaKnown RBP21.56■■□□□ 1.04
SNF8-217ENST00000576353 OR6C70A6NIJ9 312 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 PRRG2O14669 202 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 ABCB7O75027 752 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 REM1O75628 298 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 PRPS1L1P21108 318 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 KRT20P35900 424 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 MAGEA5P43359 124 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 ZNF155Q12901 538 aaPredicted RBP21.56■■□□□ 1.04
SNF8-217ENST00000576353 PTGR1Q14914 329 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 ZNHIT3Q15649 155 aaPredicted RBP21.56■■□□□ 1.04
SNF8-217ENST00000576353 C3AR1Q16581 482 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 SLC44A2Q8IWA5 706 aaPredicted RBP21.56■■□□□ 1.04
SNF8-217ENST00000576353 CHERPQ8IWX8 916 aaKnown RBP21.56■■□□□ 1.04
SNF8-217ENST00000576353 HGDQ93099 445 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 TMBIM1Q969X1 311 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 ARL8AQ96BM9 186 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 PPP1R36Q96LQ0 422 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 ZNF597Q96LX8 424 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 JSRP1Q96MG2 331 aaPredicted RBP21.56■■□□□ 1.04
SNF8-217ENST00000576353 RILPQ96NA2 401 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 COL21A1Q96P44 957 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 METTL7AQ9H8H3 244 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 AKTIPQ9H8T0 292 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 ATAD3AQ9NVI7 634 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 PNPOQ9NVS9 261 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 ASIC5Q9NY37 505 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 SH3BGRL2Q9UJC5 107 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 OR10H1Q9Y4A9 318 aa21.56■■□□□ 1.04
SNF8-217ENST00000576353 SNNO75324 88 aaPredicted RBP21.55■■□□□ 1.04
SNF8-217ENST00000576353 TRIM3O75382 744 aaPredicted RBP21.55■■□□□ 1.04
SNF8-217ENST00000576353 NME6O75414 186 aaPredicted RBP21.55■■□□□ 1.04
SNF8-217ENST00000576353 PSMG1O95456 288 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 RNF224P0DH78 156 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 H2AFXP16104 143 aaPredicted RBP21.55■■□□□ 1.04
SNF8-217ENST00000576353 SNTA1Q13424 505 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 CPTPQ5TA50 214 aa21.55■■□□□ 1.04
SNF8-217ENST00000576353 TMEM81Q6P7N7 255 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms