RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CSNK2A2P19784 350 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 CRYGSP22914 178 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 STX2P32856 288 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 CD79BP40259 229 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 FGFBP1Q14512 234 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 CCNYL2Q5T2Q4 361 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 FRG2Q64ET8 278 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 SLC48A1Q6P1K1 146 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 CHMP1BQ7LBR1 199 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 GOLGA7Q7Z5G4 137 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 YTHDF3Q7Z739 585 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 PPM1NQ8N819 430 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 FRG2BQ96QU4 278 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 SLC39A3Q9BRY0 314 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 MED18Q9BUE0 208 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 ITPAQ9BY32 194 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 BRINP2Q9C0B6 783 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 GALNT9Q9HCQ5 603 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 MAT2BQ9NZL9 334 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 BCAP29Q9UHQ4 241 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 DTX4Q9Y2E6 619 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 RNF11Q9Y3C5 154 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 PCDHA9Q9Y5H5 950 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 SAR1BQ9Y6B6 198 aa14.28□□□□□ -0.12
HERPUD1-215ENST00000568676 FAM187AA6NFU0 413 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 DEFB108AA8MXU0 73 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 UGT2B11O75310 529 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 KLK1P06870 262 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 NEK2P51955 445 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 MAPK12P53778 367 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 CLDN18P56856 261 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 EEFSECP57772 596 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 HMGCS1Q01581 520 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 MGAT2Q10469 447 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 P4HA3Q7Z4N8 544 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 CENPLQ8N0S6 344 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 CAVIN3Q969G5 261 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 ATP6V1E2Q96A05 226 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 ERP27Q96DN0 273 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 SLC35A4Q96G79 324 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 SFXN2Q96NB2 322 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 WFIKKN1Q96NZ8 548 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 COL21A1Q96P44 957 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 ERP44Q9BS26 406 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 NTMT1Q9BV86 223 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 GSX2Q9BZM3 304 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 C6orf203Q9P0P8 240 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 CES1P1Q9UKY3 287 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 TMCO1Q9UM00 188 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 WIF1Q9Y5W5 379 aa14.27□□□□□ -0.13
HERPUD1-215ENST00000568676 SMNDC1O75940 238 aaKnown RBP eCLIP14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 PEPDP12955 493 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 PCSK6P29122 969 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 GMPRP36959 345 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 ARL1P40616 181 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 CCNG1P51959 295 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 GPX6P59796 221 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 MRPS22P82650 360 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 CAV1Q03135 178 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 FAM27E3Q08E93 113 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 IFT88Q13099 833 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 EFR3AQ14156 821 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 NNATQ16517 81 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 TTC19Q6DKK2 380 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 CIARTQ8N365 385 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 METTL4Q8N3J2 472 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 LRRN4CLQ8ND94 238 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 RDH11Q8TC12 318 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 KCTD4Q8WVF5 259 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 STARD4Q96DR4 205 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 PIK3IP1Q96FE7 263 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 FAM111AQ96PZ2 611 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 MDFIQ99750 246 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 FAIM2Q9BWQ8 316 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 DKKL1Q9UK85 242 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 PLLPQ9Y342 182 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 ZNF780BQ9Y6R6 833 aa14.26□□□□□ -0.13
HERPUD1-215ENST00000568676 C2orf72A6NCS6 295 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 SLC22A20A6NK97 555 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 KIAA1324LA8MWY0 1029 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 LINC01387J3KSC0 135 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 KLHL2O95198 593 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 CBX7O95931 251 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 TGM6O95932 706 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 C2P06681 752 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 POU2F1P14859 743 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 CNTFP26441 200 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 KRT20P35900 424 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 UGT2B10P36537 528 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 STARP49675 285 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 TRA2BP62995 288 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 OCRLQ01968 901 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 GGTA1PQ4G0N0 100 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 FAM111BQ6SJ93 734 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 CXXC5Q7LFL8 322 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 SAMD14Q8IZD0 417 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 MEIOBQ8N635 442 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 ADCY4Q8NFM4 1077 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 OR52R1Q8NGF1 315 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 ZNF675Q8TD23 568 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms