RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 IFT88Q13099 833 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 SLC30A6Q6NXT4 461 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 PAGE2Q7Z2X7 111 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 TRIM42Q8IWZ5 723 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 C18orf12Q96KH6 178 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 SFXN3Q9BWM7 321 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 RAB17Q9H0T7 212 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 ELOVL6Q9H5J4 265 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 NEUROD4Q9HD90 331 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 AHSPQ9NZD4 102 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 FETUBQ9UGM5 382 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 ZNF639Q9UID6 485 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 FBXL2Q9UKC9 423 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 ZANQ9Y493 2812 aa14.1□□□□□ -0.15
NME3-211ENST00000568561 CCDC189A1A4V9 331 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 C1orf226A1L170 272 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 PDYNP01213 254 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 ATP1B1P05026 303 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 RHOXF2BP0C7M4 288 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 CPN1P15169 458 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 NAGAP17050 411 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 CSNK2A2P19784 350 aaPredicted RBP14.09□□□□□ -0.15
NME3-211ENST00000568561 ADSLP30566 484 aaPredicted RBP14.09□□□□□ -0.15
NME3-211ENST00000568561 EMDP50402 254 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 SLC7A5Q01650 507 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 MAP4K2Q12851 820 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 OR5M10Q6IEU7 315 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 TMEM81Q6P7N7 255 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 MILR1Q7Z6M3 343 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 ADGRE4PQ86SQ3 457 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 BIVMQ86UB2 503 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 IFNEQ86WN2 208 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 C1orf52Q8N6N3 182 aaKnown RBP14.09□□□□□ -0.15
NME3-211ENST00000568561 TMBIM1Q969X1 311 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 TM4SF18Q96CE8 201 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 CNRIP1Q96F85 164 aaPredicted RBP14.09□□□□□ -0.15
NME3-211ENST00000568561 TM9SF2Q99805 663 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 NTMT1Q9BV86 223 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 TAS2R10Q9NYW0 307 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 CLCF1Q9UBD9 225 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 EXO1Q9UQ84 846 aaKnown RBP14.09□□□□□ -0.15
NME3-211ENST00000568561 CFL2Q9Y281 166 aa14.09□□□□□ -0.15
NME3-211ENST00000568561 B4DXG7 233 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 PLOD2O00469 737 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 ACOX3O15254 700 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 CDH16O75309 829 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 REM1O75628 298 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 RCBTB2O95199 551 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 INHBBP09529 407 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 LHX2P50458 406 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 CDH13P55290 713 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 GFRA1P56159 465 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 CORO7P57737 925 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 NKX6-1P78426 367 aaPredicted RBP14.08□□□□□ -0.16
NME3-211ENST00000568561 HMGCS1Q01581 520 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 TCHHL1Q5QJ38 904 aaPredicted RBP14.08□□□□□ -0.16
NME3-211ENST00000568561 LETMD1Q6P1Q0 360 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 METTL2BQ6P1Q9 378 aaKnown RBP14.08□□□□□ -0.16
NME3-211ENST00000568561 ENPP6Q6UWR7 440 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 C17orf53Q8N3J3 647 aaPredicted RBP14.08□□□□□ -0.16
NME3-211ENST00000568561 SFXN2Q96NB2 322 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 DACH2Q96NX9 599 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 PFDN4Q9NQP4 134 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 C6orf203Q9P0P8 240 aaPredicted RBP14.08□□□□□ -0.16
NME3-211ENST00000568561 HEY2Q9UBP5 337 aa14.08□□□□□ -0.16
NME3-211ENST00000568561 HEATR5AQ86XA9 2040 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 PCNX3Q9H6A9 2034 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 ROS1P08922 2347 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 FRG2CA6NGY1 282 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 STX16-NPEPL1H3BU86 382 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 STX16O14662 325 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 SMIM24O75264 130 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 GUCY1B2O75343 617 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 CBR3O75828 277 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 TNFSF13O75888 250 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 TGM6O95932 706 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 RPS17P08708 135 aaKnown RBP14.07□□□□□ -0.16
NME3-211ENST00000568561 PPICP45877 212 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 CLDN18P56856 261 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 SNTA1Q13424 505 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 GGTA1PQ4G0N0 100 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 CLEC9AQ6UXN8 241 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 CXorf67Q86X51 503 aaPredicted RBP14.07□□□□□ -0.16
NME3-211ENST00000568561 PLCZ1Q86YW0 608 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 GRAMD2AQ8IUY3 354 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 SELENOMQ8WWX9 145 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 KAT2AQ92830 837 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 WNT2BQ93097 391 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 ISL2Q96A47 359 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 CTHRC1Q96CG8 243 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 ZNF681Q96N22 645 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 ZFP3Q96NJ6 502 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 COL21A1Q96P44 957 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 ADOQ96SZ5 270 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 ACSS3Q9H6R3 686 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 ZDHHC18Q9NUE0 388 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 BEX4Q9NWD9 120 aaPredicted RBP14.07□□□□□ -0.16
NME3-211ENST00000568561 DKKL1Q9UK85 242 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms