RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 HTR6P50406 440 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 ART1P52961 327 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 RAE1P78406 368 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 MRPS22P82650 360 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 CRYZQ08257 329 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 LCP2Q13094 533 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 EFR3AQ14156 821 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 FNDC7Q5VTL7 733 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 NSUN5P2Q63ZY6 315 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 ENPP6Q6UWR7 440 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 LARP4Q71RC2 724 aaKnown RBP eCLIP5.85□□□□□ -1.47
TCF4-228ENST00000565393 KIF18BQ86Y91 864 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 PLCZ1Q86YW0 608 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 SLC44A2Q8IWA5 706 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 WDSUB1Q8N9V3 476 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 FAM83FQ8NEG4 500 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 OR9A2Q8NGT5 310 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 UBLCP1Q8WVY7 318 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 NRGNQ92686 78 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 RNASE6Q93091 150 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 HGDQ93099 445 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 CTHRC1Q96CG8 243 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 L3HYPDHQ96EM0 354 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 TMEM237Q96Q45 408 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 KCNA7Q96RP8 456 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 GPATCH1Q9BRR8 931 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 OSBPL11Q9BXB4 747 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 SHCBP1LQ9BZQ2 653 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 PRDM14Q9GZV8 571 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 CALHM2Q9HA72 323 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 MIEF1Q9NQG6 463 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 RRAGDQ9NQL2 400 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 SDHAF3Q9NRP4 125 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 TAS2R10Q9NYW0 307 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 CRIM1Q9NZV1 1036 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 PSMC3IPQ9P2W1 217 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 GRID1Q9ULK0 1009 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 RPH3AQ9Y2J0 694 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 OR10H1Q9Y4A9 318 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 MDC1Q14676 2089 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 USP9YO00507 2555 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 ICE1Q9Y2F5 2266 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 HEATR5BQ9P2D3 2071 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 NAV2Q8IVL1 2488 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CPAMD8Q8IZJ3 1885 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 TLDC2A0PJX2 215 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 PRAMEF25A6NGN4 478 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 TUBAL3A6NHL2 446 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 OR6C70A6NIJ9 312 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CD8B2A6NJW9 211 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 EEF1E1-BLOC1S5C9J1V9 151 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 G3V2L1 256 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 H0Y3Z8 333 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 UBFD1O14562 309 aaKnown RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 CASKO14936 926 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 SNPHO15079 494 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 TO15178 435 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 EEF1E1O43324 174 aaKnown RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 ABCB7O75027 752 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CTAG2O75638 210 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 JUNP05412 331 aaKnown RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 TMIGD3P0DMS9 266 aaPredicted RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 CPA3P15088 417 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CPN1P15169 458 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 DDCP20711 480 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 TIA1P31483 386 aaKnown RBP eCLIP5.84□□□□□ -1.47
TCF4-228ENST00000565393 DNAJA1P31689 397 aaKnown RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 OPRM1P35372 400 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 SOX18P35713 384 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 RFX3P48380 749 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CLK3P49761 638 aaKnown RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 ASCL1P50553 236 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 NCBP2P52298 156 aaKnown RBP eCLIP5.84□□□□□ -1.47
TCF4-228ENST00000565393 IST1P53990 364 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 PNLIPRP2P54317 469 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 PRKAG1P54619 331 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 FOXA1P55317 472 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CORO7P57737 925 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 ZNHIT3Q15649 155 aaPredicted RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 CCDC153Q494R4 210 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 ZNF628Q5EBL2 1059 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 NHSL2Q5HYW2 709 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 AAGABQ6PD74 315 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 ZYG11AQ6WRX3 759 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 IFNEQ86WN2 208 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 FAM9CQ8IZT9 166 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CNPY4Q8N129 248 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 NAXEQ8NCW5 288 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 OR4K17Q8NGC6 315 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 OR4N2Q8NGD1 307 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 LINC01560Q8TB33 94 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 ZPLD1Q8TCW7 415 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 ZNF675Q8TD23 568 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 EFHD2Q96C19 240 aaPredicted RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 INTS12Q96CB8 462 aaKnown RBP5.84□□□□□ -1.47
TCF4-228ENST00000565393 DTNBP1Q96EV8 351 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 SFXN2Q96NB2 322 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 TM9SF2Q99805 663 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 TUBA1CQ9BQE3 449 aa5.84□□□□□ -1.47
TCF4-228ENST00000565393 CLEC4MQ9H2X3 399 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms