RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DHFRP00374 187 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 HPXP02790 462 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 RHCEP18577 417 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 LAG3P18627 525 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 MAPK1P28482 360 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 ATP12AP54707 1039 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 WNT4P56705 351 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 SNRPGP62308 76 aaKnown RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 CACNG1Q06432 222 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 RAB33AQ14088 237 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 SYT14P1Q58G82 188 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 IER5LQ5T953 404 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 MRPS31Q92665 395 aaKnown RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 FATE1Q969F0 183 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 ART5Q96L15 291 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 POLR2J3Q9H1A7 115 aaKnown RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 METTL17Q9H7H0 456 aaPredicted RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 EMC7Q9NPA0 242 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 DLL4Q9NR61 685 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 FAM120CQ9NX05 1096 aaKnown RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 OR6C2Q9NZP2 312 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 PCDHGA9Q9Y5G4 932 aaKnown RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 ENPP4Q9Y6X5 453 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 PLXNA3P51805 1871 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 GAPDHSO14556 408 aaPredicted RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 GATBO75879 557 aaKnown RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 TIMP1P01033 207 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF7P17097 686 aaPredicted RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 IRS1P35568 1242 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 ZP1P60852 638 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 ABRQ12979 859 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 COL9A2Q14055 689 aaPredicted RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 POM121L1PQ3SYA9 428 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 GPRC6AQ5T6X5 926 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 MEDAGQ5VYS4 303 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 TPGS2Q68CL5 300 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 BICRALQ6AI39 1079 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 LYPD4Q6UWN0 246 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF527Q8NB42 609 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 SMG7Q92540 1137 aaKnown RBP15.37■□□□□ 0.05
LINC00554-201ENST00000564841 DMRTA2Q96SC8 542 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 ABHD1Q96SE0 405 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 DDOQ99489 341 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 SLC35A5Q9BS91 424 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 MVB12BQ9H7P6 319 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 CCL26Q9Y258 94 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 GSTK1Q9Y2Q3 226 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 FKBP7Q9Y680 259 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 CKAP5Q14008 2032 aa15.37■□□□□ 0.05
LINC00554-201ENST00000564841 DSPPQ9NZW4 1301 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 SAP18O00422 153 aaKnown RBP15.36■□□□□ 0.05
LINC00554-201ENST00000564841 SSNA1O43805 119 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 EIF4EP06730 217 aaKnown RBP15.36■□□□□ 0.05
LINC00554-201ENST00000564841 LPLP06858 475 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 CD9P21926 228 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 CDK6Q00534 326 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 ADAM15Q13444 863 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 BOP1Q14137 746 aaKnown RBP15.36■□□□□ 0.05
LINC00554-201ENST00000564841 SLC5A12Q1EHB4 618 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 ALKAL2Q6UX46 152 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 DEF8Q6ZN54 512 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 VRK3Q8IV63 474 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 CMTM8Q8IZV2 173 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 PIGKQ92643 395 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 PLD4Q96BZ4 506 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF689Q96CS4 500 aaPredicted RBP15.36■□□□□ 0.05
LINC00554-201ENST00000564841 NLNQ9BYT8 704 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 SCAMP2O15127 329 aaKnown RBP15.36■□□□□ 0.05
LINC00554-201ENST00000564841 RAB36O95755 333 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 CBX7O95931 251 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 PEPDP12955 493 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 ZP3P21754 424 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 AOAHP28039 575 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 ACSM2AQ08AH3 577 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 ACSM2BQ68CK6 577 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 OLIG3Q7RTU3 272 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 LSM14AQ8ND56 463 aaKnown RBP15.36■□□□□ 0.05
LINC00554-201ENST00000564841 SFXN2Q96NB2 322 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 TNFRSF10DQ9UBN6 386 aa15.36■□□□□ 0.05
LINC00554-201ENST00000564841 GNG14A0A1W2PPG7 69 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ANXA4P09525 319 aaPredicted RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 SIM1P81133 766 aaPredicted RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF791Q3KP31 576 aaPredicted RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 GCNT6Q5T4J0 391 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 FAM27D1Q5T7N8 215 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 OR8J1Q8NGP2 316 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 OR2T4Q8NH00 348 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 CSGALNACT1Q8TDX6 532 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 TCEAL4Q96EI5 215 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ZFYVE1Q9HBF4 777 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 MRPL15Q9P015 296 aaKnown RBP15.35■□□□□ 0.05
LINC00554-201ENST00000564841 FNIP2Q9P278 1114 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 CACNG2Q9Y698 323 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 C7orf66A4D0T2 115 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 MFSD2BA6NFX1 497 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 ZNF98A6NK75 572 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 TCRBP04435 133 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 NR2F6P10588 404 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 IDSP22304 550 aa15.35■□□□□ 0.05
LINC00554-201ENST00000564841 HNF1BP35680 557 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms