RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CLTAP09496 248 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 DLATP10515 647 aaKnown RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 CD59P13987 128 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 GNSP15586 552 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 SERPINB6P35237 376 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 P2RY2P41231 377 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 CCR2P41597 374 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 SERPINH1P50454 418 aaKnown RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 ATXN3P54252 364 aaPredicted RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 RPL10AP62906 217 aaKnown RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 GFPT1Q06210 699 aaPredicted RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 NPRL3Q12980 569 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 SRSF5Q13243 272 aaKnown RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 CDH18Q13634 790 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 DMC1Q14565 340 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 TMEM132DQ14C87 1099 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 PON2Q15165 354 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 TAB1Q15750 504 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 ZBTB6Q15916 424 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 EXT1Q16394 746 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 KIF26BQ2KJY2 2108 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 EOGTQ5NDL2 527 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 ATP1A1-AS1Q5TC04 95 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 TCEAL6Q6IPX3 200 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 ZNF770Q6IQ21 691 aaPredicted RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 FAM53AQ6NSI3 398 aaPredicted RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 SLC25A47Q6Q0C1 308 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 DHRS11Q6UWP2 260 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 Q6ZS52 159 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 ZER1Q7Z7L7 766 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 TMEM126BQ8IUX1 230 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 THEM5Q8N1Q8 247 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 CARNMT1Q8N4J0 409 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 SMYD1Q8NB12 490 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 TSTD1Q8NFU3 115 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 TRIM58Q8NG06 486 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 MGARPQ8TDB4 240 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 SMAP2Q8WU79 429 aaPredicted RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 TMEM190Q8WZ59 177 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 NR4A3Q92570 626 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 RFT1Q96AA3 541 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 OTUB2Q96DC9 234 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 TCEAL4Q96EI5 215 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 MTMR9Q96QG7 549 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 PRMT1Q99873 361 aaKnown RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 ZNF559Q9BR84 538 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 DGCR6LQ9BY27 220 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 RAB34Q9BZG1 259 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 ATP13A3Q9H7F0 1226 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 ECT2Q9H8V3 914 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 VIPAS39Q9H9C1 493 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 GTSE1Q9NYZ3 720 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 UBQLN1Q9UMX0 589 aaKnown RBP3.24□□□□□ -1.89
HERC1-215ENST00000561436 PPP1R3CQ9UQK1 317 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 CHD6Q8TD26 2715 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 USP34Q70CQ2 3546 aa3.24□□□□□ -1.89
HERC1-215ENST00000561436 FLNBO75369 2602 aaKnown RBP3.23□□□□□ -1.89
HERC1-215ENST00000561436 A0A087X0K7 114 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 MAGEB16A2A368 324 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 CCDC162PA2VCL2 907 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 SMIM30A4D0T7 59 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 MTMR11A4FU01 709 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ARHGEF35A5YM69 484 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ANTXRLA6NF34 631 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 MSGN1A6NI15 193 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 H3BMM5 538 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 LAD1O00515 517 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ZNF195O14628 629 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 SURF4O15260 269 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 CLDN3O15551 220 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 NEMFO60524 1076 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 HSF2BPO75031 334 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 SOCS5O75159 536 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 KHDRBS3O75525 346 aaKnown RBP3.23□□□□□ -1.89
HERC1-215ENST00000561436 IGLV1-44P01699 117 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 CD48P09326 243 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 PATE4P0C8F1 98 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ODC1P11926 461 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 P4HA1P13674 534 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 GNB3P16520 340 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 GABRR2P28476 465 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 MAGEB1P43366 347 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 BRCC3P46736 316 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 OR3A2P47893 321 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 IRX4P78413 519 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ACTN3Q08043 901 aaPredicted RBP3.23□□□□□ -1.89
HERC1-215ENST00000561436 SRSF9Q13242 221 aaKnown RBP eCLIP3.23□□□□□ -1.89
HERC1-215ENST00000561436 RALGAPA2Q2PPJ7 1873 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 HLA-BQ31612 363 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 AARDQ4LEZ3 155 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 SLC39A12Q504Y0 691 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 KCTD11Q693B1 232 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 SLC27A4Q6P1M0 643 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ARHGAP11AQ6P4F7 1023 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 NHLRC1Q6VVB1 395 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 RUFY3Q7L099 469 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 CATSPER3Q86XQ3 398 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 TMEM86AQ8N2M4 240 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 GPATCH11Q8N954 259 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ST7LQ8TDW4 575 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms