RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 KIF17Q9P2E2 1029 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 SLC9A8Q9Y2E8 581 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 EME2A4GXA9 379 aaPredicted RBP12.05□□□□□ -0.48
SNX1-211ENST00000560829 TMEM221A6NGB7 291 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 TGFBR3LH3BV60 316 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 M0R296 226 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 OR10H2O60403 315 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 COQ9O75208 318 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 CBX7O95931 251 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 S1PR1P21453 382 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 PRKAR1BP31321 381 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 RYKP34925 604 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 POLR2IP36954 125 aaKnown RBP12.05□□□□□ -0.48
SNX1-211ENST00000560829 SEPHS1P49903 392 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 PDX1P52945 283 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 HPCAP84074 193 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 SLC13A2Q13183 592 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 BIKQ13323 160 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 COLEC12Q5KU26 742 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 MLIPQ5VWP3 458 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 TMEM71Q6P5X7 295 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 DHRS4L2Q6PKH6 230 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 FRRS1Q6ZNA5 592 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 COMTD1Q86VU5 262 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 GALNT12Q8IXK2 581 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 VWA5B2Q8N398 1253 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 DTWD2Q8NBA8 298 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 FBLIM1Q8WUP2 373 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 FEVQ99581 238 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 NUDT22Q9BRQ3 303 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 FAM192AQ9GZU8 254 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 SAP130Q9H0E3 1048 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 MTHFD2LQ9H903 347 aaPredicted RBP12.05□□□□□ -0.48
SNX1-211ENST00000560829 ADAP2Q9NPF8 381 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 TUBA8Q9NY65 449 aaPredicted RBP12.05□□□□□ -0.48
SNX1-211ENST00000560829 PCDHGA8Q9Y5G5 932 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 HSPE1-MOB4S4R3N1 261 aa12.05□□□□□ -0.48
SNX1-211ENST00000560829 TMEM150CB9EJG8 249 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 BCKDKO14874 412 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 FCMRO60667 390 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 NME6O75414 186 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 AK1P00568 194 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 ALPPP05187 535 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 ALOX5P09917 674 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 ANKRD34CP0C6C1 535 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 LINGO3P0C6S8 592 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 GALNSP34059 522 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 ISL1P61371 349 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 STX4Q12846 297 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 SYT16Q17RD7 645 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 LIN52Q52LA3 116 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 YOD1Q5VVQ6 348 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 TYW3Q6IPR3 259 aaKnown RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 DGAT2L6Q6ZPD8 337 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 WDR53Q7Z5U6 358 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 GALNT5Q7Z7M9 940 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 RBM45Q8IUH3 476 aaKnown RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 LACC1Q8IV20 430 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 SLC5A8Q8N695 610 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 OR51Q1Q8NH59 317 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 OR52J3Q8NH60 311 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 OR1L3Q8NH93 324 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 PHF10Q8WUB8 498 aaKnown RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 PMM1Q92871 262 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 SDF2Q99470 211 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 PITX2Q99697 317 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 WFDC6Q9BQY6 131 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 RBCK1Q9BYM8 510 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 ZNF350Q9GZX5 532 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 GAREM1Q9H706 876 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 TRIM45Q9H8W5 580 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 NMNAT1Q9HAN9 279 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 NDRG4Q9ULP0 352 aaKnown RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 HCN4Q9Y3Q4 1203 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 TNRC6BQ9UPQ9 1833 aaKnown RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 CACNA1IQ9P0X4 2223 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 PCDH17O14917 1159 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 SIGLEC6O43699 453 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 SEC24DO94855 1032 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 CCNB2O95067 398 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 NKX2-2O95096 273 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 GUSBP08236 651 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 FOLR1P15328 257 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 CBLP22681 906 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 STT3AP46977 705 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 CLK3P49761 638 aaKnown RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 SMIM11AP58511 58 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 NPRL3Q12980 569 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 DUSP8Q13202 625 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 GANABQ14697 944 aaKnown RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 ZNF311Q5JNZ3 666 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 ZNF770Q6IQ21 691 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 GUSBP11Q6P575 273 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 VANGL1Q8TAA9 524 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 FKBP10Q96AY3 582 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 ZNF501Q96CX3 271 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 RBM18Q96H35 190 aaKnown RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 ZNF578Q96N58 590 aaPredicted RBP12.04□□□□□ -0.48
SNX1-211ENST00000560829 ALPK1Q96QP1 1244 aa12.04□□□□□ -0.48
SNX1-211ENST00000560829 OR1F2PQ96R84 312 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms