RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 CASTOR2A6NHX0 329 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 A6NIN4 97 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 STMND1H3BQB6 276 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TLR4O00206 839 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 STK25O00506 426 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 GPR182O15218 404 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 SNAPC5O75971 98 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 HOXB9P17482 250 aaPredicted RBP18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TNFRSF1BP20333 461 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 CRISP1P54107 249 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 ACTR1AP61163 376 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 GCNT6Q5T4J0 391 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 PTOV1Q86YD1 416 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 GPR135Q8IZ08 494 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 RELL2Q8NC24 303 aaPredicted RBP18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TTC16Q8NEE8 873 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 OR4C15Q8NGM1 316 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 NT5C3BQ969T7 300 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 NKIRAS2Q9NYR9 191 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 MGAT4CQ9UBM8 478 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 FTSJ1Q9UET6 329 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 CCL27Q9Y4X3 112 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 KCTD3Q9Y597 815 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 CLIC1O00299 241 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 GABRDO14764 452 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 ARPC5O15511 151 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TXNL1O43396 289 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 SOD1P00441 154 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 LMO2P25791 158 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 RGS4P49798 205 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 RAG2P55895 527 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 RAB5BP61020 215 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 HTR4Q13639 388 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 RNF212Q495C1 297 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 PGAP1Q75T13 922 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TSEN54Q7Z6J9 526 aaKnown RBP18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 KRT77Q7Z794 578 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 SYNPOQ8N3V7 929 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TOMM5Q8N4H5 51 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TMIEQ8NEW7 156 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 OR10K1Q8NGX5 313 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TADA1Q96BN2 335 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 ZYG11BQ9C0D3 744 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 RBM22Q9NW64 420 aaKnown RBP eCLIP18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 RPS6KB2Q9UBS0 482 aa18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 TIMM13Q9Y5L4 95 aaPredicted RBP18.1■□□□□ 0.49
SEMA4B-215ENST00000560089 ARL5CA6NH57 179 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 MOXD2PA6NHM9 499 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 MID1O15344 667 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 PQBP1O60828 265 aaKnown RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 AKR7A3O95154 331 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 DRD5P21918 477 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 ECH1Q13011 328 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 ELP2Q6IA86 826 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 DHRS7BQ6IAN0 325 aaPredicted RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 B3GLCTQ6Y288 498 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 BTN2A1Q7KYR7 527 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 GPSM1Q86YR5 675 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 KAT2AQ92830 837 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 TMEM41AQ96HV5 264 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 SPSB2Q99619 263 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 MAP3K3Q99759 626 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 RNF32Q9H0A6 362 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 EXOSC3Q9NQT5 275 aaKnown RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 NFKBIL1Q9UBC1 381 aaPredicted RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 ASH2LQ9UBL3 628 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 SF3B6Q9Y3B4 125 aaKnown RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 LCMT2O60294 686 aaKnown RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 PRAMEF2O60811 474 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 FZD7O75084 574 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 SEMA7AO75326 666 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 SOX30O94993 753 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 FEN1P39748 380 aaKnown RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 EIF2S3P41091 472 aaKnown RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 LRRC74AQ0VAA2 488 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 DUSP4Q13115 394 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 SYTL3Q4VX76 610 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 SGO1Q5FBB7 561 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 ZRANB3Q5FWF4 1079 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 RNASE12Q5GAN4 147 aaKnown RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 BCDIN3DQ7Z5W3 292 aaKnown RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 KLHL36Q8N4N3 616 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 OR56B4Q8NH76 319 aa18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 ZNF707Q96C28 371 aaPredicted RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 C11orf24Q96F05 449 aaPredicted RBP18.09■□□□□ 0.49
SEMA4B-215ENST00000560089 TERTO14746 1132 aaKnown RBP18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 ZDHHC11BP0C7U3 371 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 HLA-DPA1P20036 260 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 MST1P26927 711 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 ETV5P41161 510 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 UBXN2BQ14CS0 331 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 ZNF613Q6PF04 617 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 DBF4BQ8NFT6 615 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 THAP6Q8TBB0 222 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 NTAN1Q96AB6 310 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 LRTM1Q9HBL6 345 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 MARK1Q9P0L2 795 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 NEU3Q9UQ49 428 aa18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 NUP214P35658 2090 aaPredicted RBP18.08■□□□□ 0.49
SEMA4B-215ENST00000560089 TMEM200CA6NKL6 621 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms