RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TMEM150CB9EJG8 249 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 H3BN98 237 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 FOXS1O43638 330 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 FHP07954 510 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 CD247P20963 164 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 C21orf33P30042 268 aaPredicted RBP11.19□□□□□ -0.62
CCDC38-202ENST00000546386 TLX1P31314 330 aaPredicted RBP11.19□□□□□ -0.62
CCDC38-202ENST00000546386 GABRA3P34903 492 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 CAPZBP47756 277 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 AFF3P51826 1226 aaKnown RBP11.19□□□□□ -0.62
CCDC38-202ENST00000546386 CSTF1Q05048 431 aaKnown RBP11.19□□□□□ -0.62
CCDC38-202ENST00000546386 TARDBPQ13148 414 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC38-202ENST00000546386 APOFQ13790 326 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 KIF26BQ2KJY2 2108 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 CRB2Q5IJ48 1285 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 CLEC12AQ5QGZ9 265 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 AHSA2Q719I0 299 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 LPCAT2Q7L5N7 544 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 CA13Q8N1Q1 262 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 SVOPLQ8N434 492 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 GIMAP5Q96F15 307 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 SPACA7Q96KW9 195 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 SERINC2Q96SA4 455 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 MRPS26Q9BYN8 205 aaKnown RBP11.19□□□□□ -0.62
CCDC38-202ENST00000546386 NRSN2Q9GZP1 204 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 SEMA6CQ9H3T2 930 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 ANKHQ9HCJ1 492 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 PCDHGB3Q9Y5G1 929 aa11.19□□□□□ -0.62
CCDC38-202ENST00000546386 DSPP15924 2871 aaKnown RBP11.18□□□□□ -0.62
CCDC38-202ENST00000546386 TMEM247A6NEH6 219 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 A8MVJ9 347 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 INMTO95050 263 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 FOLR1P15328 257 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 PORP16435 677 aaPredicted RBP11.18□□□□□ -0.62
CCDC38-202ENST00000546386 TGFBR1P36897 503 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 HNRNPKP61978 463 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC38-202ENST00000546386 PRR5P85299 388 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 BNC1Q01954 994 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 TGM3Q08188 693 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 CDK5R2Q13319 367 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 ZNF267Q14586 743 aaPredicted RBP11.18□□□□□ -0.62
CCDC38-202ENST00000546386 C6orf141Q5SZD1 244 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 TCEAL6Q6IPX3 200 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 ARHGAP22Q7Z5H3 698 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 B3GNT8Q7Z7M8 397 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 SDR16C5Q8N3Y7 309 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 GEMIN6Q8WXD5 167 aaKnown RBP11.18□□□□□ -0.62
CCDC38-202ENST00000546386 TCEAL3Q969E4 200 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 MYCBPQ99417 103 aaPredicted RBP11.18□□□□□ -0.62
CCDC38-202ENST00000546386 PIP5K1AQ99755 562 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 ROGDIQ9GZN7 287 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 SLC38A1Q9H2H9 487 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 GPR27Q9NS67 375 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 TAS2R7Q9NYW3 318 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 PADI2Q9Y2J8 665 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 AP3M1Q9Y2T2 418 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 GVINP1Q7Z2Y8 2422 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 EMC8O43402 210 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 ANGPTL1O95841 491 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 FADS2O95864 444 aaKnown RBP11.18□□□□□ -0.62
CCDC38-202ENST00000546386 CH25HO95992 272 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 CRHBPP24387 322 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 CSF2RBP32927 897 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 XCR1P46094 333 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 CRISP3P54108 245 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 RAD23AP54725 363 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 CLDN6P56747 220 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 STX4Q12846 297 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 CCDC103Q8IW40 242 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 OR52R1Q8NGF1 315 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 OR52E4Q8NGH9 312 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC38-202ENST00000546386 PCDHGA2Q9Y5H1 932 aa11.18□□□□□ -0.62
CCDC38-202ENST00000546386 CACNA1CQ13936 2221 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 IGHV3-20A0A0C4DH32 117 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 HYKKA2RU49 373 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 LMO7DNF2Z398 122 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 H0YJX3 145 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 SMIM10L1P0DMW3 83 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 ACP2P11117 423 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 SERPINB1P30740 379 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 ARL4DP49703 201 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 RAB39AQ14964 217 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 PRR22Q8IZ63 422 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 ZNF540Q8NDQ6 660 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 ANKRD9Q96BM1 317 aaPredicted RBP11.17□□□□□ -0.62
CCDC38-202ENST00000546386 SMIM10Q96HG1 83 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 GTPBP2Q9BX10 602 aaKnown RBP11.17□□□□□ -0.62
CCDC38-202ENST00000546386 NPLQ9BXD5 320 aaPredicted RBP11.17□□□□□ -0.62
CCDC38-202ENST00000546386 PITHD1Q9GZP4 211 aaPredicted RBP11.17□□□□□ -0.62
CCDC38-202ENST00000546386 C3orf14Q9HBI5 128 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 PNO1Q9NRX1 252 aaKnown RBP11.17□□□□□ -0.62
CCDC38-202ENST00000546386 WARS2Q9UGM6 360 aaKnown RBP11.17□□□□□ -0.62
CCDC38-202ENST00000546386 KCNE5Q9UJ90 142 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 MAPRE3Q9UPY8 281 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 ENPP4Q9Y6X5 453 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 OR5K4A6NMS3 321 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 C10orf142B7Z368 130 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 GUCY1B2O75343 617 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 SLC5A2P31639 672 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms