RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 V9GYQ6 96 aa12.84□□□□□ -0.35
SCARB1-209ENST00000545305 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.35
SCARB1-209ENST00000545305 TEX51A0A1B0GUA7 166 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 A0A1W2PNU3 283 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 PCDH17O14917 1159 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 CNOT3O75175 753 aaKnown RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 ZNF682O95780 498 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 AK1P00568 194 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 TFPTP0C1Z6 253 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 HOXB6P17509 224 aaKnown RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 S1PR1P21453 382 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 SLC7A1P30825 629 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 FOLR3P41439 243 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 MAN2A2P49641 1150 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 CLCN2P51788 898 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 EFNA3P52797 238 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 ELOAQ14241 798 aaKnown RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 SNCBQ16143 134 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 FAM98BQ52LJ0 330 aaKnown RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 GPAT3Q53EU6 434 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 SFT2D3Q587I9 215 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 TBCELQ5QJ74 424 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 PRAMEF8Q5VWM4 474 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 PRAMEF7Q5VXH5 474 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 ZNF517Q6ZMY9 492 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 LANCL3Q6ZV70 420 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 CCDC80Q76M96 950 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 KRT73Q86Y46 540 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 COX18Q8N8Q8 333 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 MORN4Q8NDC4 146 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 SIMC1Q8NDZ2 872 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 SLC2A12Q8TD20 617 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 SLC38A5Q8WUX1 472 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 ADAMTS14Q8WXS8 1223 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 CDS1Q92903 461 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 DUS3LQ96G46 650 aaKnown RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 SENP5Q96HI0 755 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 ZNF607Q96SK3 696 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 PIGUQ9H490 435 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 POLR1BQ9H9Y6 1135 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 CACYBPQ9HB71 228 aaKnown RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 GIN1Q9NXP7 522 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 FOXJ2Q9P0K8 574 aa12.83□□□□□ -0.36
SCARB1-209ENST00000545305 ZFHX2Q9C0A1 2572 aaPredicted RBP12.83□□□□□ -0.36
SCARB1-209ENST00000545305 FAM149AA5PLN7 773 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 SAGE2PA6NJ88 616 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 HRKO00198 91 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 BAG2O95816 211 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 IGHEP01854 428 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 RAB40ALP0C0E4 278 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 RBMS1P29558 406 aaKnown RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 EMDP50402 254 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 FOXL2P58012 376 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 GABREP78334 506 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 CHRNB3Q05901 458 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 DUSP8Q13202 625 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 MYBPC3Q14896 1274 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 SYPL1Q16563 259 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 DUSP5Q16690 384 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 IRAK1BP1Q5VVH5 260 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 EIF3MQ7L2H7 374 aaKnown RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 WDR53Q7Z5U6 358 aaPredicted RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 ADGRG5Q8IZF4 528 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 ENDOVQ8N8Q3 282 aaKnown RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 ANKFN1Q8N957 763 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 SLC16A11Q8NCK7 471 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 GPR151Q8TDV0 419 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 CANT1Q8WVQ1 401 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 LZICQ8WZA0 190 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 SLC47A1Q96FL8 570 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 SLC35A4Q96G79 324 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 SLC46A1Q96NT5 459 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 TRNT1Q96Q11 434 aaKnown RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 LMF2Q9BU23 707 aaKnown RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 SPATA5L1Q9BVQ7 753 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 YY1AP1Q9H869 796 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 TRIM45Q9H8W5 580 aaPredicted RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 AKIRIN1Q9H9L7 192 aaPredicted RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 CCM2LQ9NUG4 571 aaPredicted RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 STX18Q9P2W9 335 aaKnown RBP12.82□□□□□ -0.36
SCARB1-209ENST00000545305 AP4S1Q9Y587 144 aa12.82□□□□□ -0.36
SCARB1-209ENST00000545305 A0A0G2JPF8 293 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 OR6C76A6NM76 312 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 A8MVJ9 347 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 HNRNPCL2B2RXH8 293 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 HNRNPCL3B7ZW38 293 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 SUV39H1O43463 412 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 NME6O75414 186 aaPredicted RBP12.81□□□□□ -0.36
SCARB1-209ENST00000545305 SERPINB7O75635 380 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 PRKD3O94806 890 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 PGM3O95394 542 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 DDAH2O95865 285 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 HNRNPCL4P0DMR1 293 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 FCGR1AP12314 374 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 ANPEPP15144 967 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 CD82P27701 267 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 GABRA3P34903 492 aa12.81□□□□□ -0.36
SCARB1-209ENST00000545305 PCBP3P57721 371 aaKnown RBP12.81□□□□□ -0.36
SCARB1-209ENST00000545305 RPS15P62841 145 aaKnown RBP12.81□□□□□ -0.36
SCARB1-209ENST00000545305 POU6F2P78424 691 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms