RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ASNA1O43681 348 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 CTNSO60931 367 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ALBP02768 609 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 RPLP0P05388 317 aaKnown RBP11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 NPIPA8P0DM63 369 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ALAS2P22557 587 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 SSTR4P31391 388 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 MAP3K8P41279 467 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ARL4DP49703 201 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 CDH15P55291 814 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 FAM214AQ32MH5 1076 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 C1orf189Q5VU69 101 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 MLIPQ5VWP3 458 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 FOXB2Q5VYV0 432 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 LAIR2Q6ISS4 152 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ZAR1Q86SH2 424 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 SLC5A8Q8N695 610 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 METTL25Q8N6Q8 603 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 OR9Q2Q8NGE9 314 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 OR52R1Q8NGF1 315 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF354BQ96LW1 612 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 PIP5K1AQ99755 562 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 DUSP23Q9BVJ7 150 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ALOXE3Q9BYJ1 711 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF696Q9H7X3 374 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 CXorf21Q9HAI6 301 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 NDOR1Q9UHB4 597 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 SCOCQ9UIL1 159 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 MKLN1Q9UL63 735 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 A0A087WV62 115 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 TRBV4-1A0A0J9YWV2 114 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 H3BNH8 94 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 DLL1O00548 723 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ABCB7O75027 752 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 PDE9AO76083 593 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 TIAF1O95411 115 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 NTN1O95631 604 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 CLPSP04118 112 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 IFNW1P05000 195 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 IGFBP5P24593 272 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 MAGEA8P43361 318 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 AVPR1BP47901 424 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 CLK3P49761 638 aaKnown RBP11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 IL1RL1Q01638 556 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 TYW3Q6IPR3 259 aaKnown RBP11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 TMEM71Q6P5X7 295 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 DEF8Q6ZN54 512 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 Q6ZPB1 254 aaPredicted RBP11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 C16orf62Q7Z3J2 963 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ARHGAP22Q7Z5H3 698 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ZBTB44Q8NCP5 570 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 OR6T1Q8NGN1 323 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 TSLPQ969D9 159 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF607Q96SK3 696 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 GTPBP2Q9BX10 602 aaKnown RBP11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 SYNDIG1Q9H7V2 258 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 ENAMQ9NRM1 1142 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 PNPLA3Q9NST1 481 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 AASSQ9UDR5 926 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 KCNE5Q9UJ90 142 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 KCND3Q9UK17 655 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 GMEB2Q9UKD1 530 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 NTNG1Q9Y2I2 539 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 PCDHGB3Q9Y5G1 929 aa11.44□□□□□ -0.58
AP003559.1-201ENST00000540906 FRYLO94915 3013 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 A0A0G2JPF8 293 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 TMEM247A6NEH6 219 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 HNRNPCL2B2RXH8 293 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 HNRNPCL3B7ZW38 293 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 H0YAE9 185 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 H0YIG0 161 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 ARHGAP33O14559 1287 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 PRKNO60260 465 aaPredicted RBP11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 OR10H2O60403 315 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 TPST2O60704 377 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 LGI1O95970 557 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 PABPC4LP0CB38 370 aaKnown RBP11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 HNRNPCL4P0DMR1 293 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 ETS2P15036 469 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 PNLIPP16233 465 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 ELK4P28324 431 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 LSM11P83369 360 aaKnown RBP eCLIP11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 HOXC5Q00444 222 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 KCNC4Q03721 635 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 APOFQ13790 326 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 SEC23BQ15437 767 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 MAPK14Q16539 360 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 CTU2Q2VPK5 515 aaKnown RBP11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 ARHGAP11BQ3KRB8 267 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 LAIR1Q6GTX8 287 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 KRT80Q6KB66 452 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 SLC23A3Q6PIS1 610 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 BMP8AQ7Z5Y6 402 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 CARFQ8N187 725 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 VWA5B2Q8N398 1253 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 CLIP4Q8N3C7 705 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF321PQ8N8H1 164 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 FAM181AQ8N9Y4 354 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 OR4N2Q8NGD1 307 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms