RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RPH3ALQ9UNE2 315 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 STX8Q9UNK0 236 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 EXOC7Q9UPT5 735 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PPIL1Q9Y3C6 166 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 STRAPQ9Y3F4 350 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TNIKQ9UKE5 1360 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TRAV18A0A075B6X5 111 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 IGHV3-20A0A0C4DH32 117 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 hCG_38984A0A1B0GV85 526 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZSCAN5BA6NJL1 495 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 IFITM10A6NMD0 228 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 H3BMH7 237 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DNALI1O14645 258 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 STX7O15400 261 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MAGEB2O15479 319 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF264O43296 627 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CIDEAO60543 219 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SAP30O75446 220 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 NEBLO76041 1014 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DIRAS3O95661 229 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CPNE6O95741 557 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GOT2P00505 430 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MT-ND2P03891 347 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GSTA1P08263 222 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 HMBSP08397 361 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 LHCGRP22888 699 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GPR183P32249 361 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SOX6P35712 828 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MATR3P43243 847 aaKnown RBP eCLIP0.88□□□□□ -2.274e-6■■■□□ 17.2
HIF1A-204ENST00000539097 TSFMP43897 325 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SLC1A6P48664 564 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DHPSP49366 369 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CCL11P51671 97 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DCDC1P59894 354 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 RPL36AP83881 106 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GALK2Q01415 458 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TRAP1Q12931 704 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 LTB4RQ15722 352 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CLPPQ16740 277 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 UBE2SQ16763 222 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PARP6Q2NL67 630 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 USH1GQ495M9 461 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GLIPR1L2Q4G1C9 344 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF542PQ5EBM4 170 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZFAND6Q6FIF0 208 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 NEPROQ6NW34 567 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SLC27A4Q6P1M0 643 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DPY19L2P2Q6ZN68 376 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 Q6ZPB1 254 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM26Q6ZUK4 368 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 C9orf139Q6ZV77 190 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SSX9Q7RTT3 188 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 BNIPLQ7Z465 357 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PAQR7Q86WK9 346 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CARM1Q86X55 608 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CATSPERDQ86XM0 798 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 LGI2Q8N0V4 545 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CEP112Q8N8E3 955 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DRAXINQ8NBI3 349 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNRF1Q8ND25 227 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 FAM83FQ8NEG4 500 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 OR4L1Q8NH43 312 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 EXOC6Q8TAG9 804 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 APOBEC4Q8WW27 367 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SMPDL3AQ92484 453 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 AZIN2Q96A70 460 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 THOC1Q96FV9 657 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF486Q96H40 463 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CXorf58Q96LI9 332 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 RUFY1Q96T51 708 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CITED1Q99966 193 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 COMMD4Q9H0A8 199 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CRLF2Q9HC73 371 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 APMAPQ9HDC9 416 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 IL1RAPQ9NPH3 570 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 FANCFQ9NPI8 374 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 INTS9Q9NV88 658 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MED17Q9NVC6 651 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GDAP2Q9NXN4 497 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TAAR2Q9P1P5 351 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CLIP2Q9UDT6 1046 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZMAT5Q9UDW3 170 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 USP16Q9Y5T5 823 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SAR1BQ9Y6B6 198 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 FHOD3Q2V2M9 1422 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CUX1P39880 1505 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MAP3K19Q56UN5 1328 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MAPK8IP3Q9UPT6 1336 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 WDR97A6NE52 1622 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TRBV11-1A0A0K0K1C0 115 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 A0A1B0GTI1 187 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 A0A1W2PQ72 361 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MACROD2A1Z1Q3 448 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MAGEB16A2A368 324 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SMIM1B2RUZ4 78 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF732B4DXR9 585 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PRSS44E7EML9 344 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 AP3B1O00203 1094 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SDHDO14521 159 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 EPHB6O15197 1021 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms