RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PRAMEF18Q5VWM3 479 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 LIN54Q6MZP7 749 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 ZCCHC12Q6PEW1 402 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 ANKRD46Q86W74 232 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 GPR135Q8IZ08 494 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TRMT10AQ8TBZ6 339 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SPPL2AQ8TCT8 520 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 KCTD12Q96CX2 325 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 EGLN1Q9GZT9 426 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 MFSD1Q9H3U5 465 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 BEX1Q9HBH7 125 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 GPN1Q9HCN4 374 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SIX4Q9UIU6 781 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TP53TG5Q9Y2B4 290 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 DHRS7Q9Y394 339 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 COL11A2P13942 1736 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 BTBD17A6NE02 478 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 COLCA2A8K830 154 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 NEDD8-MDP1E9PL57 170 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TMEM189-UBE2V1I3L0A0 370 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 RFXANKO14593 260 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 KHDRBS3O75525 346 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 GATBO75879 557 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 THP07101 528 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SBK2P0C263 348 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TFPIP10646 304 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 ZNF14P17017 642 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 PPT1P50897 306 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 CDH12P55289 794 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 ERVPABLB-1P60509 514 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SPIBQ01892 262 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 POU4F2Q12837 409 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 IRF4Q15306 451 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 AKIRIN2Q53H80 203 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 OR5M10Q6IEU7 315 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 NCEH1Q6PIU2 408 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 CASP12Q6UXS9 341 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 ACOT11Q8WXI4 607 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SLAMF9Q96A28 289 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 RAB3CQ96E17 227 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 RHOVQ96L33 236 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 HBEGFQ99075 208 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 DOHHQ9BU89 302 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TSSK6Q9BXA6 273 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SMCO4Q9NRQ5 59 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TMEM184CQ9NVA4 438 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 WBP1LQ9NX94 342 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 NKIRAS2Q9NYR9 191 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 CBLCQ9ULV8 474 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 MED16Q9Y2X0 877 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 YARS2Q9Y2Z4 477 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 FXYD6-FXYD2A0A087WZ82 144 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 OR2M5A3KFT3 312 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM86C2PA6NEL3 165 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 CREBL2O60519 120 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 KCNK5O95279 499 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 EDN1P05305 212 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 EDN3P14138 238 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 MGMTP16455 207 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 DRD5P21918 477 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 CSF2RBP32927 897 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 ARL2P36404 184 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 CSNK1EP49674 416 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 AGTR2P50052 363 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 RABGGTBP53611 331 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 RAC1P63000 192 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 GANABQ14697 944 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 FAM69AQ5T7M9 428 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 C9orf131Q5VYM1 1079 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 HHIPL2Q6UWX4 724 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 ALKAL1Q6UXT8 129 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 PRICKLE2Q7Z3G6 844 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 OR6V1Q8N148 313 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 C1orf127Q8N9H9 656 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 OR52J3Q8NH60 311 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 NELL1Q92832 810 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 GTPBP3Q969Y2 492 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 ZNF354BQ96LW1 612 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 C19orf43Q9BQ61 176 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 SOX7Q9BT81 388 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 ADAT1Q9BUB4 502 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 FXYD6Q9H0Q3 95 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 DZANK1Q9NVP4 752 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 DNAJC27Q9NZQ0 273 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 FTSJ1Q9UET6 329 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 IRGMA1A4Y4 181 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 NCF1BA6NI72 391 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 NCF1CA8MVU1 366 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 TSTD3H0UI37 97 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 I6L893 689 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 GABRDO14764 452 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 KLK8O60259 260 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 NCR1O76036 304 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 IGHV2-5P01817 119 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 SRPRAP08240 638 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 ATXN1LP0C7T5 689 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 TIMP2P16035 220 aa8.06□□□□□ -1.12
SRGAP1-202ENST00000537556 ABOP16442 354 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms