RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 TM9SF4Q92544 642 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 MS4A6EQ96DS6 147 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 RNFT2Q96EX2 444 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 PRR14Q9BWN1 585 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 MCOLN1Q9GZU1 580 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 SAP130Q9H0E3 1048 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 QRSL1Q9H0R6 528 aaKnown RBP10.42□□□□□ -0.74
HDAC9-228ENST00000524023 OSGEPL1Q9H4B0 414 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 TIGARQ9NQ88 270 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 PRDM7Q9NQW5 492 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 ZNF221Q9UK13 617 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 YARS2Q9Y2Z4 477 aaKnown RBP10.42□□□□□ -0.74
HDAC9-228ENST00000524023 KCNE3Q9Y6H6 103 aa10.42□□□□□ -0.74
HDAC9-228ENST00000524023 IRGMA1A4Y4 181 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SNTNA6NMZ2 147 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 AP3D1O14617 1153 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 LATO43561 262 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 KRT8P05787 483 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 FHP07954 510 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 HOXB3P14651 431 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ATP5A1P25705 553 aaKnown RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SDC2P34741 201 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 TAS2R41P59536 307 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 RPS25P62851 125 aaKnown RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 TPBGQ13641 420 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 CCDC92Q53HC0 331 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 PRAMEF8Q5VWM4 474 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 PRAMEF7Q5VXH5 474 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ABHD17CQ6PCB6 329 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 TMEM107Q6UX40 140 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 FAM131AQ6UXB0 335 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 PRICKLE2Q7Z3G6 844 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SLC7A5P1Q8MH63 180 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 C12orf76Q8N812 135 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ACOT4Q8N9L9 421 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 OR56A1Q8NGH5 318 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 OR8D4Q8NGM9 314 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 TEX47Q8TBZ9 253 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 GNPDA2Q8TDQ7 276 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 GATAD2BQ8WXI9 593 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SMG7Q92540 1137 aaKnown RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SLC9A6Q92581 669 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 MOAP1Q96BY2 351 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 KCTD7Q96MP8 289 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 RERGLQ9H628 205 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 C11orf49Q9H6J7 331 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 WDR26Q9H7D7 661 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 MRPS30Q9NP92 439 aaKnown RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ISYNA1Q9NPH2 558 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 IMP3Q9NV31 184 aaKnown RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 THAP10Q9P2Z0 257 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 GPR52Q9Y2T5 361 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SF3B6Q9Y3B4 125 aaKnown RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 CDH23Q9H251 3354 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 A0A1W2PQL4 384 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 A0A1W2PS29 197 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 FAM170BA6NMN3 283 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 GPR89AB7ZAQ6 455 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SYT5O00445 386 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 MID1O15344 667 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 LRRTM2O43300 516 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 FRS3O43559 492 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 UBXN7O94888 489 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 AIFM1O95831 613 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 POU2F2P09086 479 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 GPR89BP0CG08 455 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 C8orf89P0DMQ9 161 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 PKLRP30613 574 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 MTNR1AP48039 350 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SLC9A3P48764 834 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SCN1BQ07699 218 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 TSPAN31Q12999 210 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 DUSP6Q16828 381 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 MINDY4Q4G0A6 757 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ZNF311Q5JNZ3 666 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ATAD3CQ5T2N8 411 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 AGBL4Q5VU57 503 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 C18orf63Q68DL7 685 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 XKRXQ6PP77 449 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 HSDL2Q6YN16 418 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 RAB43Q86YS6 212 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ANKK1Q8NFD2 765 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 OR2L8Q8NGY9 312 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 C1GALT1C1Q96EU7 318 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ASB16Q96NS5 453 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 OR7D2Q96RA2 312 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ARHGDIGQ99819 225 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 MED18Q9BUE0 208 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SLC38A1Q9H2H9 487 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 TP63Q9H3D4 680 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 SLC6A20Q9NP91 592 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 CES1P1Q9UKY3 287 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 ENTPD4Q9Y227 616 aa10.41□□□□□ -0.74
HDAC9-228ENST00000524023 EXOSC1Q9Y3B2 195 aaKnown RBP10.41□□□□□ -0.74
HDAC9-228ENST00000524023 LINC00854A0A1B0GVQ3 168 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 KDM4EB2RXH2 506 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-228ENST00000524023 EMC8O43402 210 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 GUCY1B2O75343 617 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 LIMS3P0CW19 117 aa10.4□□□□□ -0.74
HDAC9-228ENST00000524023 LIMS4P0CW20 117 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms