RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 LRRC25Q8N386 305 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 ZNF321PQ8N8H1 164 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CAMKVQ8NCB2 501 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 MBD3L2Q8NHZ7 208 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 SLC13A3Q8WWT9 602 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 KRT35Q92764 455 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 MARK4Q96L34 752 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 BIRC8Q96P09 236 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 PANX3Q96QZ0 392 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 TRIB1Q96RU8 372 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 EBNA1BP2Q99848 306 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 PLA2G12AQ9BZM1 189 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 RHBGQ9H310 441 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 LRRC40Q9H9A6 602 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 ZMAT3Q9HA38 289 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 PNO1Q9NRX1 252 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 FAM114A2Q9NRY5 505 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 SACM1LQ9NTJ5 587 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 ZNHIT6Q9NWK9 470 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 KLHL28Q9NXS3 571 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 PPIEQ9UNP9 301 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 PCDHGB3Q9Y5G1 929 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 MED12LQ86YW9 2145 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 ZNF785A8K8V0 405 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ERN1O75460 977 aaKnown RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ZFAND5O76080 213 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ZFPL1O95159 310 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 CHEK2O96017 543 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 CATP04040 527 aaKnown RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 P04436 131 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 GYPCP04921 128 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 F7P08709 466 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 TMIGD3P0DMS9 266 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 CDH1P12830 882 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 PAX1P15863 534 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ALOX12P18054 663 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 MAKP20794 623 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 GRIA1P42261 906 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 SLCO1A2P46721 670 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 HNRNPFP52597 415 aaKnown RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ATP5J2P56134 94 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 KCNJ2P63252 427 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 PRAMEP78395 509 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ZBED6P86452 979 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ZNF844Q08AG5 666 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 SLC18A3Q16572 532 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 CLEC12BQ2HXU8 276 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 KLHL38Q2WGJ6 581 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 SPDYE7PQ495Y7 208 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 CCDC181Q5TID7 509 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 HECTD2Q5U5R9 776 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 DARS2Q6PI48 645 aaKnown RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 MBOAT1Q6ZNC8 495 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 GCNT2Q8N0V5 402 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 LIX1Q8N485 282 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ROBO4Q8WZ75 1007 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 LRRC45Q96CN5 670 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 PPP1R2P1Q96PQ5 205 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 TIMP4Q99727 224 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 FERMT1Q9BQL6 677 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 CCDC77Q9BR77 488 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 MLST8Q9BVC4 326 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ALOXE3Q9BYJ1 711 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 REG4Q9BYZ8 158 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 AMBRA1Q9C0C7 1298 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 SPNS1Q9H2V7 528 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 GALNT9Q9HCQ5 603 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 SH2D2AQ9NP31 389 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 CCDC177Q9NQR7 707 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 HOMER3Q9NSC5 361 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 ZNF701Q9NV72 531 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 TMEM184CQ9NVA4 438 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 REXO2Q9Y3B8 237 aaKnown RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 NOX1Q9Y5S8 564 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 EXPH5Q8NEV8 1989 aa5.74□□□□□ -1.49
VPS13B-211ENST00000522802 PRKDCP78527 4128 aaKnown RBP5.74□□□□□ -1.49
VPS13B-211ENST00000522802 NINQ8N4C6 2090 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 A0A1W2PS29 197 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 CD8B2A6NJW9 211 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 A8MV72 311 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-211ENST00000522802 CASKO14936 926 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 KPNA5O15131 536 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 CD3EAPO15446 510 aaKnown RBP5.73□□□□□ -1.49
VPS13B-211ENST00000522802 FZD7O75084 574 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 SPDEFO95238 335 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 SERPIND1P05546 499 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 RNH1P13489 461 aaKnown RBP5.73□□□□□ -1.49
VPS13B-211ENST00000522802 CRYGSP22914 178 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 RPS3P23396 243 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS13B-211ENST00000522802 GDF1P27539 372 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 FMO4P31512 558 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 OPRM1P35372 400 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 HSD17B2P37059 387 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 HNF4AP41235 474 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 SKIV2L2P42285 1042 aaKnown RBP5.73□□□□□ -1.49
VPS13B-211ENST00000522802 SLC1A1P43005 524 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 TTPAP49638 278 aa5.73□□□□□ -1.49
VPS13B-211ENST00000522802 ARFIP2P53365 341 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms