RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SHARPINQ9H0F6 387 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 PCDHAC1Q9H158 963 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 TRIM45Q9H8W5 580 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 IL1RL2Q9HB29 575 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 BATF3Q9NR55 127 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 SDR39U1Q9NRG7 319 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 CMTM6Q9NX76 183 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 PGPEP1Q9NXJ5 209 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 PKD2L2Q9NZM6 624 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 STOX2Q9P2F5 926 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 KLHL42Q9P2K6 505 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 ZNF282Q9UDV7 671 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 BCAP29Q9UHQ4 241 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 LRCH1Q9Y2L9 728 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 KLHL20Q9Y2M5 609 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 TNPO3Q9Y5L0 923 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 HEATR5BQ9P2D3 2071 aa6.72□□□□□ -1.33
CTNNA1-227ENST00000521387 ALPK2Q86TB3 2170 aa6.71□□□□□ -1.33
CTNNA1-227ENST00000521387 HYKKA2RU49 373 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 PINLYPA6NC86 204 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 A6NHS1 94 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 FXYD1O00168 92 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 NME4O00746 187 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 SGTAO43765 313 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 SEC24DO94855 1032 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 CHEK2O96017 543 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 MPC1LP0DKB6 136 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 IDO1P14902 403 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 IGFBP5P24593 272 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 CXCR2P25025 360 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 HMOX2P30519 316 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 PIK3CGP48736 1102 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 SLC7A2P52569 658 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 AQP4P55087 323 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 WNT3P56703 355 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 ERVK-8P63133 956 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 IRX1P78414 480 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 OCA2Q04671 838 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 TRAP1Q12931 704 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 ABRAXAS2Q15018 415 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 TRIP10Q15642 601 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 LRRC36Q1X8D7 754 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 TTLL9Q3SXZ7 439 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 PAGE3Q5JUK9 113 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 PLAG1Q6DJT9 500 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 ZFP1Q6P2D0 407 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 C20orf204Q6ZNR8 217 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 DET1Q7L5Y6 550 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 SPATA24Q86W54 205 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 AMIGO1Q86WK6 493 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 KIF18BQ86Y91 864 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 VRK3Q8IV63 474 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 SLC15A3Q8IY34 581 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 LILRA2Q8N149 483 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 PCYOX1LQ8NBM8 494 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 OR52E1Q8NGJ3 308 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 METTL6Q8TCB7 284 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 TSPEARQ8WU66 669 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 ATP6V1E2Q96A05 226 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 SLCO4A1Q96BD0 722 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 ROPN1LQ96C74 230 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 SPDL1Q96EA4 605 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 COPS8Q99627 209 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 EGFL8Q99944 293 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 ZSCAN5AQ9BUG6 496 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 BRINP2Q9C0B6 783 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 IPPKQ9H8X2 491 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 COPS7BQ9H9Q2 264 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 ZNF304Q9HCX3 659 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 WWOXQ9NZC7 414 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 JKAMPQ9P055 326 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 RIMS3Q9UJD0 308 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 PDE10AQ9Y233 779 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 RNF11Q9Y3C5 154 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 CCL27Q9Y4X3 112 aa6.71□□□□□ -1.34
CTNNA1-227ENST00000521387 ARHGAP21Q5T5U3 1957 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 A0A1B0GVC2 190 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 A0A1W2PP18 115 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 TCRBV3S1A0A5B6 114 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 FAM234BA2RU67 622 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 SH3D21A4FU49 640 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 FITM1A5D6W6 292 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 HSPB2A8KAH6 182 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 K7EPI3 171 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 MANBAO00462 879 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 BCKDKO14874 412 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 LIN7AO14910 233 aaPredicted RBP6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 PEX1O43933 1283 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 SLC22A3O75751 556 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 SMNDC1O75940 238 aaKnown RBP eCLIP6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 RSL1D1O76021 490 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 OTCP00480 354 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 OR56A5P0C7T3 313 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 ATP1B2P14415 290 aaPredicted RBP6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 EPORP19235 508 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 ATP6V1B2P21281 511 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 NDUFS1P28331 727 aa6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 PBLDP30039 288 aaPredicted RBP6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 PEBP1P30086 187 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-227ENST00000521387 CEACAM8P31997 349 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms