RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 FAF1Q9UNN5 650 aaPredicted RBP9.5□□□□□ -0.89
HTT-204ENST00000508321 PCDHGB3Q9Y5G1 929 aa9.5□□□□□ -0.89
HTT-204ENST00000508321 LOC400499M0QZD8 3231 aa9.5□□□□□ -0.89
HTT-204ENST00000508321 C15orf38-AP3S2A0A0A6YYH1 394 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 ASPDHA6ND91 283 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 ABCB7O75027 752 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 ITGA10O75578 1167 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 CPSF4O95639 269 aaKnown RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 NAGAP17050 411 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 EFNA1P20827 205 aaPredicted RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 LCN1P31025 176 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 CHI3L1P36222 383 aaPredicted RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 SSR4P51571 173 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 PSMD4P55036 377 aaKnown RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 RPP38P78345 283 aaKnown RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 MRPS22P82650 360 aaKnown RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 FADDQ13158 208 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 CYLC2Q14093 348 aaPredicted RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 TLR1Q15399 786 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 TRMT5Q32P41 509 aaKnown RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 MMEL1Q495T6 779 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 CYP27C1Q4G0S4 372 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 EXOSC6Q5RKV6 272 aaKnown RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 CDC73Q6P1J9 531 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 SLC2A7Q6PXP3 512 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 DNAJC14Q6Y2X3 702 aaPredicted RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 ARPINQ7Z6K5 226 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 DHDDSQ86SQ9 333 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 SNX32Q86XE0 403 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 SLC34A3Q8N130 599 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 SIRT6Q8N6T7 355 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 C9orf43Q8TAL5 461 aaPredicted RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 EXTL1Q92935 676 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 ROPN1LQ96C74 230 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 ACTRT3Q9BYD9 372 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 TRIM4Q9C037 500 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 TRIM45Q9H8W5 580 aaPredicted RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 GPATCH2Q9NW75 528 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 ARMCX1Q9P291 453 aa9.49□□□□□ -0.89
HTT-204ENST00000508321 GPR55Q9Y2T6 319 aaPredicted RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 DSPP15924 2871 aaKnown RBP9.49□□□□□ -0.89
HTT-204ENST00000508321 TNRC6AQ8NDV7 1962 aaKnown RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 LAMA5O15230 3695 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 TRBV5-3A0A0A0MS03 114 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 TMEM200CA6NKL6 621 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 A6NL46 340 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 A8MUI8 341 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 MRASO14807 208 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 DPM1O60762 260 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 OR2J2O76002 312 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 NKX2-2O95096 273 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 HMGN2P05204 90 aaKnown RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 ALOX5P09917 674 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 FBXO45P0C2W1 286 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 HOXB9P17482 250 aaPredicted RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 PTPN6P29350 595 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 PTGER1P34995 402 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 MAP3K8P41279 467 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 CDKN2CP42773 168 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 MNAT1P51948 309 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 PSG6Q00889 435 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 NFYCQ13952 458 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 LASP1Q14847 261 aaKnown RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 KRT72Q14CN4 511 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 LACTB2Q53H82 288 aaPredicted RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 PIGGQ5H8A4 983 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 REP15Q6BDI9 236 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 HACD2Q6Y1H2 254 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 ZNF621Q6ZSS3 439 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 BEST3Q8N1M1 668 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 TMEM156Q8N614 296 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 GOLM1Q8NBJ4 401 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 LSM14AQ8ND56 463 aaKnown RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 OR5AK3PQ8NH89 298 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 ZFP90Q8TF47 636 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 NUDT8Q8WV74 236 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 OIT3Q8WWZ8 545 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 ASB15Q8WXK1 588 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 JADE3Q92613 823 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 SPACA9Q96E40 222 aaPredicted RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 MAGED4Q96JG8 741 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 SGCZQ96LD1 299 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 RASL10BQ96S79 203 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 UBL7Q96S82 380 aaPredicted RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 SECISBP2Q96T21 854 aaKnown RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 SH3GL1Q99961 368 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 UTP23Q9BRU9 249 aaKnown RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 INPP5KQ9BT40 448 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 PAIP1Q9H074 479 aaKnown RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 NXF5Q9H1B4 397 aaKnown RBP9.48□□□□□ -0.89
HTT-204ENST00000508321 PIGUQ9H490 435 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 TPT1P8Q9HAU6 139 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 HHATLQ9HCP6 504 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 EQTNQ9NQ60 294 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 GID8Q9NWU2 228 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 NDE1Q9NXR1 346 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 DTX4Q9Y2E6 619 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 AP3M1Q9Y2T2 418 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 OR10H1Q9Y4A9 318 aa9.48□□□□□ -0.89
HTT-204ENST00000508321 MGAQ8IWI9 3026 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms