RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 DNAJC11Q9NVH1 559 aa12.53□□□□□ -0.4
DDR1-260ENST00000507533 PHF11Q9UIL8 331 aa12.53□□□□□ -0.4
DDR1-260ENST00000507533 CORO1CQ9ULV4 474 aaPredicted RBP12.53□□□□□ -0.4
DDR1-260ENST00000507533 NFU1Q9UMS0 254 aa12.53□□□□□ -0.4
DDR1-260ENST00000507533 HEATR5AQ86XA9 2040 aa12.52□□□□□ -0.4
DDR1-260ENST00000507533 FAM159BA6NKW6 160 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 EMC8O43402 210 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 PPM1BO75688 479 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 SLU7O95391 586 aaKnown RBP12.52□□□□□ -0.41
DDR1-260ENST00000507533 PPP3CBP16298 524 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 ZNF37AP17032 561 aaPredicted RBP12.52□□□□□ -0.41
DDR1-260ENST00000507533 STX2P32856 288 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 GALNSP34059 522 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 THBS2P35442 1172 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 CDKN1AP38936 164 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 ILF2Q12905 390 aaKnown RBP12.52□□□□□ -0.41
DDR1-260ENST00000507533 LAPTM5Q13571 262 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 TSNQ15631 228 aaKnown RBP12.52□□□□□ -0.41
DDR1-260ENST00000507533 EXOC3L2Q2M3D2 409 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 PAGE2BQ5JRK9 111 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 TMEM81Q6P7N7 255 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 NUP54Q7Z3B4 507 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 NKAPQ8N5F7 415 aaKnown RBP12.52□□□□□ -0.41
DDR1-260ENST00000507533 FBF1Q8TES7 1133 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 ZNF473Q8WTR7 871 aaKnown RBP12.52□□□□□ -0.41
DDR1-260ENST00000507533 FIG4Q92562 907 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 HGDQ93099 445 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 WDR34Q96EX3 536 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 OR10A5Q9H207 317 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 NINJ2Q9NZG7 142 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 KLRF1Q9NZS2 232 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 CTNNAL1Q9UBT7 734 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 PROCRQ9UNN8 238 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 PSAT1Q9Y617 370 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 CR1P17927 2039 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 MED12LQ86YW9 2145 aa12.52□□□□□ -0.41
DDR1-260ENST00000507533 GLOD5A6NK44 160 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 CXorf49A8MYA2 514 aaPredicted RBP12.51□□□□□ -0.41
DDR1-260ENST00000507533 TAPBPO15533 448 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 IGHV4-39P01824 125 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 SOD3P08294 240 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 SLC35E2BP0CK96 405 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 SLC35E2P0CK97 266 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 PCNAP12004 261 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 NAGAP17050 411 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 SRD5A2P31213 254 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 PHBP35232 272 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 BUD31P41223 144 aaPredicted RBP12.51□□□□□ -0.41
DDR1-260ENST00000507533 HNRNPH2P55795 449 aaKnown RBP12.51□□□□□ -0.41
DDR1-260ENST00000507533 SNTA1Q13424 505 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 FGFBP1Q14512 234 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 SLMAPQ14BN4 828 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 BCL2A1Q16548 175 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 FBXO48Q5FWF7 155 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 ADAMTSL2Q86TH1 951 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 ZC3HC1Q86WB0 502 aaKnown RBP12.51□□□□□ -0.41
DDR1-260ENST00000507533 WFDC8Q8IUA0 241 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 ZNF615Q8N8J6 731 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 EIF1ADQ8N9N8 165 aaKnown RBP12.51□□□□□ -0.41
DDR1-260ENST00000507533 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 CPNE1Q99829 537 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 TMEM79Q9BSE2 394 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 NXF5Q9H1B4 397 aaKnown RBP12.51□□□□□ -0.41
DDR1-260ENST00000507533 OR51B5Q9H339 312 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 CDC42EP4Q9H3Q1 356 aaKnown RBP12.51□□□□□ -0.41
DDR1-260ENST00000507533 RHOJQ9H4E5 214 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 CXorf21Q9HAI6 301 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 TMEM160Q9NX00 188 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 LPAR3Q9UBY5 353 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 LIPT1Q9Y234 373 aa12.51□□□□□ -0.41
DDR1-260ENST00000507533 ABCB7O75027 752 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 PIAS1O75925 651 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 CT62P0C5K7 136 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 TCEA1P23193 301 aaKnown RBP12.5□□□□□ -0.41
DDR1-260ENST00000507533 CNTFP26441 200 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 CASP2P42575 452 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 HSPA7P48741 367 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 IRF8Q02556 426 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 CHIT1Q13231 466 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 NAB1Q13506 487 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 ZNF460Q14592 562 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 DEPDC1Q5TB30 811 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 KHDRBS2Q5VWX1 349 aaKnown RBP12.5□□□□□ -0.41
DDR1-260ENST00000507533 PLCZ1Q86YW0 608 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 CTAGE3PQ8IX95 158 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 GALNT12Q8IXK2 581 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 UBQLNLQ8IYU4 475 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 PPM1NQ8N819 430 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 ROBO4Q8WZ75 1007 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 ESAMQ96AP7 390 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 RGMAQ96B86 450 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 CMTM7Q96FZ5 175 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 MCMBPQ9BTE3 642 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 SHARPINQ9H0F6 387 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 CNOT10Q9H9A5 744 aaKnown RBP12.5□□□□□ -0.41
DDR1-260ENST00000507533 TXNDC16Q9P2K2 825 aa12.5□□□□□ -0.41
DDR1-260ENST00000507533 FAM95CA0A1B0GW59 222 aa12.49□□□□□ -0.41
DDR1-260ENST00000507533 A0A1W2PS29 197 aa12.49□□□□□ -0.41
DDR1-260ENST00000507533 PRAMEF25A6NGN4 478 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms