RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 RPS26P62854 115 aaKnown RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 TNK1Q13470 666 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 CLPPQ16740 277 aaPredicted RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 SLC48A1Q6P1K1 146 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 DEF8Q6ZN54 512 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 SPATC1Q76KD6 591 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 LAPTM4BQ86VI4 370 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 OR2A1Q8NGT9 310 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 NT5CQ8TCD5 201 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 BRIX1Q8TDN6 353 aaKnown RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ZNF296Q8WUU4 475 aaPredicted RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 MYLIPQ8WY64 445 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 TTC9Q92623 222 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 MS4A6EQ96DS6 147 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 RNF31Q96EP0 1072 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 RNFT2Q96EX2 444 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 LRR1Q96L50 414 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 NEDD4LQ96PU5 975 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ATF6BQ99941 703 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ZNF232Q9UNY5 417 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 PLD2O14939 933 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 EMC8O43402 210 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 CHST10O43529 356 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 IDH3BO43837 385 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 SLC19A2O60779 497 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 CDRT1O95170 752 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 SOX14O95416 240 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 AGR2O95994 175 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 SDC2P34741 201 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 CLDN20P56880 219 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ERVK-21P61565 698 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 RPS25P62851 125 aaKnown RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ZMAT1Q5H9K5 638 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 NDUFAF5Q5TEU4 345 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ZNF425Q6IV72 752 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ABHD17CQ6PCB6 329 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 PAQR6Q6TCH4 344 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 GET4Q7L5D6 327 aaPredicted RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 MFSD9Q8NBP5 474 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 VANGL1Q8TAA9 524 aaPredicted RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 HOXB13Q92826 284 aaPredicted RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 OSTF1Q92882 214 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 RAB8BQ92930 207 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 RFKQ969G6 155 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 KCTD12Q96CX2 325 aaKnown RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 RSPRY1Q96DX4 576 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 PHOX2BQ99453 314 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 PLA2G12AQ9BZM1 189 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 BTBD1Q9H0C5 482 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 SAP130Q9H0E3 1048 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ANKRA2Q9H9E1 313 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ABCB9Q9NP78 766 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 TRPV5Q9NQA5 729 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 INPP5EQ9NRR6 644 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 ZNF275Q9NSD4 429 aaPredicted RBP6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 C14orf119Q9NWQ9 140 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 SNX8Q9Y5X2 465 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 RNF215Q9Y6U7 377 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 LRP4O75096 1905 aa6.78□□□□□ -1.32
LYSMD3-203ENST00000500869 NUP214P35658 2090 aaPredicted RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 C4orf51C9J302 202 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 C1QTNF3-AMACRE9PGA6 284 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 M0R3H8 397 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 KPNA3O00505 521 aaPredicted RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 SH3BP5O60239 455 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 LYPD3O95274 346 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 KRT8P05787 483 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 FEN1P39748 380 aaKnown RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 SLC1A3P43003 542 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 NR4A2P43354 598 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 MTNR1AP48039 350 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 HSPB3Q12988 150 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 MLF2Q15773 248 aaPredicted RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 DEFB115Q30KQ5 88 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 EOGTQ5NDL2 527 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 ATAT1Q5SQI0 421 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 RSBN1Q5VWQ0 802 aaPredicted RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 USP30Q70CQ3 517 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 TMCO2Q7Z6W1 182 aaPredicted RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 IQCHQ86VS3 1027 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 RAB42Q8N4Z0 105 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 PSD4Q8NDX1 1056 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 ACOT11Q8WXI4 607 aaPredicted RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 DEFB118Q96PH6 123 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 SLC38A2Q96QD8 506 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 C11orf54Q9H0W9 315 aaPredicted RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 RNF121Q9H920 327 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 SNTG1Q9NSN8 517 aa6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 THAP10Q9P2Z0 257 aaPredicted RBP6.77□□□□□ -1.32
LYSMD3-203ENST00000500869 HIDE1A8MVS5 230 aa6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 LCMT2O60294 686 aaKnown RBP6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 FMO6PO60774 539 aa6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 CYP7B1O75881 506 aa6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 CD1AP06126 327 aa6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 THBS1P07996 1170 aa6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 HOXC4P09017 264 aaPredicted RBP6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 MYL12AP19105 171 aa6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 HK1P19367 917 aa6.77□□□□□ -1.33
LYSMD3-203ENST00000500869 HIST1H1TP22492 207 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms