RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	GLYAT	Q6IB77	296 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FBXO42	Q6P3S6	717 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ABHD17C	Q6PCB6	329 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	DHRS13	Q6UX07	377 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZNF621	Q6ZSS3	439 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	RABEPK	Q7Z6M1	372 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IFNE	Q86WN2	208 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PTRH1	Q86Y79	214 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	AQP12A	Q8IXF9	295 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	HIPK4	Q8NE63	616 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	OR2L5	Q8NG80	312 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NT5C	Q8TCD5	201 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PATE1	Q8WXA2	126 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	JPH3	Q8WXH2	748 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FGF11	Q92914	225 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	RERG	Q96A58	199 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TM4SF18	Q96CE8	201 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NXPE2	Q96DL1	559 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MS4A6E	Q96DS6	147 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FAM120B	Q96EK7	910 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	DTNBP1	Q96EV8	351 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	DUS3L	Q96G46	650 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZNF764	Q96H86	408 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SLC45A3	Q96JT2	553 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZNF570	Q96NI8	536 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CCDC115	Q96NT0	180 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TRAPPC9	Q96Q05	1148 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZFYVE21	Q9BQ24	234 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SLC39A3	Q9BRY0	314 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SPATA9	Q9BWV2	254 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PCDHAC1	Q9H158	963 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	VCX3B	Q9H321	246 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	RAD21L1	Q9H4I0	556 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LYAR	Q9NX58	379 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	VAPA	Q9P0L0	249 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MAGEL2	Q9UJ55	1249 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PSME2	Q9UL46	239 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	VPS4A	Q9UN37	437 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	BTBD3	Q9Y2F9	522 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SNX13	Q9Y5W8	968 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SLCO1B1	Q9Y6L6	691 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	BSN	Q9UPA5	3926 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	USP9Y	O00507	2555 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ABCA7	Q8IZY2	2146 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ADAMTS9	Q9P2N4	1935 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TRBV5-3	A0A0A0MS03	114 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325		A0A0J9YVX5	310 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325		A0A1B0GVT2	93 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TCRBV3S1	A0A5B6	114 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	C1orf226	A1L170	272 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ELOVL7	A1L3X0	281 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	RTCA	O00442	366 aa	Known RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PPM1D	O15297	605 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	YKT6	O15498	198 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	HNRNPR	O43390	633 aa	Known RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SRPX2	O60687	465 aa	Predicted RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SCN2B	O60939	215 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SCEL	O95171	688 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	KRT75	O95678	551 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TBX6	O95947	436 aa	Predicted RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IL18BP	O95998	194 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	GBA	P04062	536 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	GPI	P06744	558 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FAM58BP	P0C7Q3	252 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LAMP1	P11279	417 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TYRP1	P17643	537 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	DDC	P20711	480 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MAG	P20916	626 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	HIST1H1T	P22492	207 aa	Predicted RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ATP5A1	P25705	553 aa	Known RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PSMA4	P25789	261 aa	Known RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SLC7A1	P30825	629 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TLX1	P31314	330 aa	Predicted RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	HOXD12	P35452	270 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	GPR3	P46089	330 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ALDH9A1	P49189	494 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MANF	P55145	182 aa	Known RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MAZ	P56270	477 aa	Known RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	WNT3	P56703	355 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TMPRSS3	P57727	454 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MTPN	P58546	118 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SKP1	P63208	163 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MRPS22	P82650	360 aa	Known RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MC1R	Q01726	317 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SLAMF1	Q13291	335 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	DYNC1I2	Q13409	638 aa	Known RBP	4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PDE7A	Q13946	482 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	DEFB133	Q30KQ1	61 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	RABL3	Q5HYI8	236 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IRAK1BP1	Q5VVH5	260 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CD276	Q5ZPR3	534 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FCRL6	Q6DN72	434 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LCN8	Q6JVE9	175 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NIPAL1	Q6NVV3	410 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IRGC	Q6NXR0	463 aa		4.98	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ERICH5	Q6P6B1	374 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms