RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SUPT3HB4E1H0 165 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 H0YC42 278 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 KLF4O43474 513 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 KERAO60938 352 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 CDH16O75309 829 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 NME6O75414 186 aaPredicted RBP11.94□□□□□ -0.5
USF1-206ENST00000491629 SUPT3HO75486 399 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 CBX7O95931 251 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 PLAUP00749 431 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 S100BP04271 92 aaPredicted RBP11.94□□□□□ -0.5
USF1-206ENST00000491629 CTAGE8P0CG41 777 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 EPB42P16452 691 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 STMN1P16949 149 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 TCEA1P23193 301 aaKnown RBP11.94□□□□□ -0.5
USF1-206ENST00000491629 CHMP24386 653 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 GAS1P54826 345 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 TPD52P55327 224 aaPredicted RBP11.94□□□□□ -0.5
USF1-206ENST00000491629 RAB10P61026 200 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 HMGCS1Q01581 520 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 SNTA1Q13424 505 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 TNK1Q13470 666 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 CUL3Q13618 768 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 CPSF6Q16630 551 aaKnown RBP eCLIP11.94□□□□□ -0.5
USF1-206ENST00000491629 KBTBD12Q3ZCT8 623 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 FAM219BQ5XKK7 198 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 ANKRD34AQ69YU3 496 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 PLCZ1Q86YW0 608 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 CTAGE4Q8IX94 777 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 ZBED8Q8IZ13 594 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 CNEP1R1Q8N9A8 125 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 RNF138Q8WVD3 245 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 FIG4Q92562 907 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 TSPAN17Q96FV3 270 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 ZC3HAV1LQ96H79 300 aaKnown RBP11.94□□□□□ -0.5
USF1-206ENST00000491629 FAM111AQ96PZ2 611 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 PRM3Q9NNZ6 103 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 ZNF701Q9NV72 531 aaPredicted RBP11.94□□□□□ -0.5
USF1-206ENST00000491629 ZNF226Q9NYT6 803 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 KLRF1Q9NZS2 232 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 SNX12Q9UMY4 172 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 RNF11Q9Y3C5 154 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 CRHP06850 196 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 NT5EP21589 574 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 SRD5A2P31213 254 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 EMDP50402 254 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 SUCLG1P53597 346 aaKnown RBP11.93□□□□□ -0.5
USF1-206ENST00000491629 GPX6P59796 221 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 PLCXD2Q0VAA5 305 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 MAP4K2Q12851 820 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 GUSBP1Q15486 140 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 TRMT12Q53H54 448 aaKnown RBP11.93□□□□□ -0.5
USF1-206ENST00000491629 LIPJQ5W064 366 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 OR5M10Q6IEU7 315 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 NUDT13Q86X67 352 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 MYLK4Q86YV6 388 aaPredicted RBP11.93□□□□□ -0.5
USF1-206ENST00000491629 L3MBTL4Q8NA19 623 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 ADCY4Q8NFM4 1077 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 OR4K14Q8NGD5 310 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 STAG3L4Q8TBR4 150 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 NXNL1Q96CM4 212 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 LCORQ96JN0 433 aaPredicted RBP11.93□□□□□ -0.5
USF1-206ENST00000491629 CENPKQ9BS16 269 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 TRIM31Q9BZY9 425 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 WDR41Q9HAD4 459 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 PSD3Q9NYI0 1048 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 PLLPQ9Y342 182 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 PCDHGA11Q9Y5H2 935 aa11.93□□□□□ -0.5
USF1-206ENST00000491629 PLCE1Q9P212 2302 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 A0A087X1B8 175 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 UQCRHLA0A096LP55 91 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 FAM159BA6NKW6 160 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 FOXE1O00358 373 aaPredicted RBP11.92□□□□□ -0.5
USF1-206ENST00000491629 POU2F1P14859 743 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 PORP16435 677 aaPredicted RBP11.92□□□□□ -0.5
USF1-206ENST00000491629 KRT15P19012 456 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 EEF1A1P68104 462 aaKnown RBP11.92□□□□□ -0.5
USF1-206ENST00000491629 SIRPAP78324 504 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 LTB4RQ15722 352 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 EEF1A1P5Q5VTE0 462 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 FAM180BQ6P0A1 224 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 PLEKHM3Q6ZWE6 761 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 KLHL7Q8IXQ5 586 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 CENPLQ8N0S6 344 aaPredicted RBP11.92□□□□□ -0.5
USF1-206ENST00000491629 ZNF610Q8N9Z0 462 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 TMBIM1Q969X1 311 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 SFXN2Q96NB2 322 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 CPNE1Q99829 537 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 MRPL1Q9BYD6 325 aaKnown RBP11.92□□□□□ -0.5
USF1-206ENST00000491629 ANKRA2Q9H9E1 313 aa11.92□□□□□ -0.5
USF1-206ENST00000491629 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
USF1-206ENST00000491629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
USF1-206ENST00000491629 TCRBV9S1A1TA0A576 114 aa11.91□□□□□ -0.5
USF1-206ENST00000491629 FRG2CA6NGY1 282 aa11.91□□□□□ -0.5
USF1-206ENST00000491629 SLC22A20A6NK97 555 aa11.91□□□□□ -0.5
USF1-206ENST00000491629 RNF212BA8MTL3 300 aa11.91□□□□□ -0.5
USF1-206ENST00000491629 C16orf97H3BN30 126 aa11.91□□□□□ -0.5
USF1-206ENST00000491629 TO15178 435 aa11.91□□□□□ -0.5
USF1-206ENST00000491629 ACOX3O15254 700 aa11.91□□□□□ -0.5
USF1-206ENST00000491629 TSPAN2O60636 221 aa11.91□□□□□ -0.5
USF1-206ENST00000491629 SIX3O95343 332 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms