RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GABRDO14764 452 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TNFRSF10CO14798 259 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PPEF2O14830 753 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CASKO14936 926 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 KIAA0355O15063 1070 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PPM1DO15297 605 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 LANCL1O43813 399 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GALR3O60755 368 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 FZD7O75084 574 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ECI2O75521 394 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CDC123O75794 336 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TOXO94900 526 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR2A4O95047 310 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SCGB1D2O95969 90 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 POMCP01189 267 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 IFNGP01579 166 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 VTNP04004 478 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HIST1H2ABP04908 130 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 EDN1P05305 212 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 KLK3P07288 261 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SYPP08247 313 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HOXC4P09017 264 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PRG2P13727 222 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF8P17098 575 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MAPK3P27361 379 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RGS4P49798 205 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HSD17B7P56937 341 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 AP1S1P61966 158 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TIAL1Q01085 375 aaKnown RBP eCLIP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CHAF1BQ13112 559 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ALKBH1Q13686 389 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PTGR1Q14914 329 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PTGES3Q15185 160 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM44Q2T9K0 475 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RFTN2Q52LD8 501 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SPANXN4Q5MJ08 99 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM74A1Q5RGS3 127 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SFRP5Q5T4F7 317 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GPRC6AQ5T6X5 926 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CDCP2Q5VXM1 449 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CD200R1LQ6Q8B3 271 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM111BQ6SJ93 734 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 IL27RAQ6UWB1 636 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GSG1LQ6UXU4 331 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 DEF8Q6ZN54 512 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HIST3H2AQ7L7L0 130 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 UBE3DQ7Z6J8 389 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 PLEKHH3Q7Z736 793 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SERINC5Q86VE9 423 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 LNX2Q8N448 690 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GPR26Q8NDV2 337 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RPLP0P6Q8NHW5 317 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RNASE11Q8TAA1 199 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 GRAPLQ8TC17 118 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 METTL6Q8TCB7 284 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 C2CD4CQ8TF44 421 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ASZ1Q8WWH4 475 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 NR4A3Q92570 626 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 HIST1H2ACQ93077 130 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 NT5C3BQ969T7 300 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 LURAP1Q96LR2 239 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC6A18Q96N87 628 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR2A7Q96R45 310 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 NEU1Q99519 415 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 WDR77Q9BQA1 342 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 INPP5KQ9BT40 448 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 DUSP16Q9BY84 665 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 DERL2Q9GZP9 239 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MFSD1Q9H3U5 465 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OSGEPL1Q9H4B0 414 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 AGO3Q9H9G7 860 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 JPH1Q9HDC5 661 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 STARD7Q9NQZ5 370 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RNF146Q9NTX7 359 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR6C2Q9NZP2 312 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 AKAP7Q9P0M2 348 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TRPS1Q9UHF7 1281 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF214Q9UL59 606 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CA5BQ9Y2D0 317 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CRYL1Q9Y2S2 319 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SF3B6Q9Y3B4 125 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 CHST2Q9Y4C5 530 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 POLR3HQ9Y535 204 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SNX11Q9Y5W9 270 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MIA3Q5JRA6 1907 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF638Q14966 1978 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 MEX3AA1L020 520 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM218A2RU14 115 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 C9orf170A2RU37 121 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR2M5A3KFT3 312 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 BLACEA4D250 179 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TRAPPC13A5PLN9 417 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 OR6C68A6NDL8 312 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 C1orf196B1AJZ1 125 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 STMND1H3BQB6 276 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 SUV39H1O43463 412 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 RGS14O43566 566 aa4.5□□□□□ -1.69
SNRNP40-206ENST00000489853 TSPAN6O43657 245 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms