RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ITPAQ9BY32 194 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 RHOJQ9H4E5 214 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 ASIC3Q9UHC3 531 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 MTO1Q9Y2Z2 717 aaKnown RBP14.58□□□□□ -0.08
USP48-210ENST00000489108 MRPS18CQ9Y3D5 142 aaKnown RBP14.58□□□□□ -0.08
USP48-210ENST00000489108 TEX264Q9Y6I9 313 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 A8MV72 311 aaPredicted RBP14.57□□□□□ -0.08
USP48-210ENST00000489108 H0YC42 278 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 PIAS1O75925 651 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 S100BP04271 92 aaPredicted RBP14.57□□□□□ -0.08
USP48-210ENST00000489108 TPD52P55327 224 aaPredicted RBP14.57□□□□□ -0.08
USP48-210ENST00000489108 CLDN15P56746 228 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 B3GALT5-AS1P59052 145 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 RPS4XP62701 263 aaKnown RBP14.57□□□□□ -0.08
USP48-210ENST00000489108 FRG1Q14331 258 aaKnown RBP14.57□□□□□ -0.08
USP48-210ENST00000489108 EXOSC7Q15024 291 aaKnown RBP14.57□□□□□ -0.08
USP48-210ENST00000489108 KRTAP24-1Q3LI83 254 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 C6orf163Q5TEZ5 329 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 ANKMY2Q8IV38 441 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 PDIK1LQ8N165 341 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 OR4K14Q8NGD5 310 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 AKAP1Q92667 903 aaKnown RBP eCLIP14.57□□□□□ -0.08
USP48-210ENST00000489108 TMEM204Q9BSN7 226 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 MCMBPQ9BTE3 642 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 MOCS1Q9NZB8 636 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 BCAP29Q9UHQ4 241 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 DKKL1Q9UK85 242 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 PROCRQ9UNN8 238 aa14.57□□□□□ -0.08
USP48-210ENST00000489108 K7EPI3 171 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 OVOL3O00110 214 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 HAX1O00165 279 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 FAM157CP0CG43 387 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 PEPDP12955 493 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 CPMP14384 443 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 IVDP26440 423 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 DPP4P27487 766 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 ACVR1BP36896 505 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 SUCLG1P53597 346 aaKnown RBP14.56□□□□□ -0.08
USP48-210ENST00000489108 ATP6V0D1P61421 351 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 POU4F1Q01851 419 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 OCRLQ01968 901 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 MGAT2Q10469 447 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 ETFDHQ16134 617 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 MYLK4Q86YV6 388 aaPredicted RBP14.56□□□□□ -0.08
USP48-210ENST00000489108 TRMT61AQ96FX7 289 aaKnown RBP14.56□□□□□ -0.08
USP48-210ENST00000489108 PBKQ96KB5 322 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 PINK1Q9BXM7 581 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 BRINP2Q9C0B6 783 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 RNF122Q9H9V4 155 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 OPTCQ9UBM4 332 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 CFL2Q9Y281 166 aa14.56□□□□□ -0.08
USP48-210ENST00000489108 PCNX3Q9H6A9 2034 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 B4DXG7 233 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 ACOX3O15254 700 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 TNFRSF21O75509 655 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 PORP16435 677 aaPredicted RBP14.55□□□□□ -0.08
USP48-210ENST00000489108 FNTAP49354 379 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 PRICKLE4Q2TBC4 344 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 ZNF662Q6ZS27 426 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 MILR1Q7Z6M3 343 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 WFDC8Q8IUA0 241 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 ADCY4Q8NFM4 1077 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 FNDC9Q8TBE3 224 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 TMCO6Q96DC7 493 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 LRRC39Q96DD0 335 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 SLCO5A1Q9H2Y9 848 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 SMYD2Q9NRG4 433 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 TSC22D4Q9Y3Q8 395 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 PCDHGA11Q9Y5H2 935 aa14.55□□□□□ -0.08
USP48-210ENST00000489108 C17orf51A8MQB3 221 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 EFCAB8A8MWE9 144 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 ABCB7O75027 752 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 REM1O75628 298 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 SOD3P08294 240 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 PPP3CBP16298 524 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 DRD5P21918 477 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 CDKN1AP38936 164 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 NEK2P51955 445 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 MAP4K2Q12851 820 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 CUL3Q13618 768 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 FGFBP1Q14512 234 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 GUSBP1Q15486 140 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 STAC2Q6ZMT1 411 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 NUDT13Q86X67 352 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 TEX9Q8N6V9 391 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 LILRB1Q8NHL6 650 aaPredicted RBP14.54□□□□□ -0.08
USP48-210ENST00000489108 RAB3IL1Q8TBN0 382 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 TMBIM1Q969X1 311 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 TSPAN17Q96FV3 270 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 UBXN10Q96LJ8 280 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 COL21A1Q96P44 957 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 NAP1L3Q99457 506 aaPredicted RBP14.54□□□□□ -0.08
USP48-210ENST00000489108 ALG9Q9H6U8 611 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 MAT2BQ9NZL9 334 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 ZNF639Q9UID6 485 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 PLLPQ9Y342 182 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 ZNF337Q9Y3M9 751 aa14.54□□□□□ -0.08
USP48-210ENST00000489108 OR6C70A6NIJ9 312 aa14.53□□□□□ -0.08
USP48-210ENST00000489108 PGRMC1O00264 195 aaKnown RBP14.53□□□□□ -0.08
USP48-210ENST00000489108 SEC14L5O43304 696 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms