RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TUFT1Q9NNX1 390 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 TEKT2Q9UIF3 430 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 KCNK6Q9Y257 313 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 SLC9A8Q9Y2E8 581 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 WSB1Q9Y6I7 421 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 SYNJ2O15056 1496 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 SDR42E2A6NKP2 422 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 USP27XA6NNY8 438 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.24□□□□□ -2.05
SMC4-219ENST00000487747 GH1P01241 217 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 CD5P06127 495 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 HOXB7P09629 217 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 MAT2AP31153 395 aaKnown RBP2.24□□□□□ -2.05
SMC4-219ENST00000487747 PFN3P60673 137 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 TFCP2Q12800 502 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 IL18R1Q13478 541 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 KCTD19Q17RG1 926 aaPredicted RBP2.24□□□□□ -2.05
SMC4-219ENST00000487747 MPPE1Q53F39 396 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 SHQ1Q6PI26 577 aaKnown RBP2.24□□□□□ -2.05
SMC4-219ENST00000487747 METTL23Q86XA0 190 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 OR8H2Q8N162 312 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 CCDC71LQ8N9Z2 235 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 ZBTB44Q8NCP5 570 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 GLYATL1Q969I3 302 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 FAM162AQ96A26 154 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 FUNDC2Q9BWH2 189 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 TMEM161AQ9NX61 479 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 SEPT10Q9P0V9 454 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 FBXL5Q9UKA1 691 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 PSG11Q9UQ72 335 aa2.24□□□□□ -2.05
SMC4-219ENST00000487747 C8orf89P0DMQ9 161 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 GHRP10912 638 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 CPA3P15088 417 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 IFNAR1P17181 557 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 CDKL1Q00532 357 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 STX1AQ16623 288 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 ADAMTSL2Q86TH1 951 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 THNSL1Q8IYQ7 743 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 RDH11Q8TC12 318 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 AP2M1Q96CW1 435 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 DNAJA3Q96EY1 480 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 C11orf24Q96F05 449 aaPredicted RBP2.23□□□□□ -2.05
SMC4-219ENST00000487747 EPSTI1Q96J88 318 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 GLT8D2Q9H1C3 349 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 NXF3Q9H4D5 531 aaKnown RBP2.23□□□□□ -2.05
SMC4-219ENST00000487747 PTGES2Q9H7Z7 377 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 DCLRE1BQ9H816 532 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 VPS18Q9P253 973 aa2.23□□□□□ -2.05
SMC4-219ENST00000487747 C11orf98E9PRG8 122 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 HTATSF1O43719 755 aaKnown RBP2.22□□□□□ -2.05
SMC4-219ENST00000487747 TRAF3IP2O43734 574 aaPredicted RBP2.22□□□□□ -2.05
SMC4-219ENST00000487747 SLU7O95391 586 aaKnown RBP2.22□□□□□ -2.05
SMC4-219ENST00000487747 APOA4P06727 396 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 CASTP20810 708 aaKnown RBP2.22□□□□□ -2.05
SMC4-219ENST00000487747 HTR1FP30939 366 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 METAP1P53582 386 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 NUCB1Q02818 461 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 PUDPQ08623 228 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 LGSNQ5TDP6 509 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 CDC42EP5Q6NZY7 148 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 ATRAIDQ6UW56 229 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 CXCL17Q6UXB2 119 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 HSD17B13Q7Z5P4 300 aaPredicted RBP2.22□□□□□ -2.05
SMC4-219ENST00000487747 TMEM126BQ8IUX1 230 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 OR4F17Q8NGA8 305 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 OR52J3Q8NH60 311 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 LHX4Q969G2 390 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 NOL4LQ96MY1 436 aaPredicted RBP2.22□□□□□ -2.05
SMC4-219ENST00000487747 OR4F4Q96R69 305 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 NICN1Q9BSH3 213 aa2.22□□□□□ -2.05
SMC4-219ENST00000487747 MEPEQ9NQ76 525 aaPredicted RBP2.22□□□□□ -2.05
SMC4-219ENST00000487747 CFDP1Q9UEE9 299 aaPredicted RBP2.22□□□□□ -2.05
SMC4-219ENST00000487747 NPIPA5A0A0B4J1W7 369 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 FAM149AA5PLN7 773 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 OOEPA6NGQ2 149 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 NPIPA5E9PKD4 350 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 H7C0S8 307 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 ABCD4O14678 606 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 EI24O14681 340 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 FIBPO43427 364 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 DKC1O60832 514 aaKnown RBP eCLIP2.21□□□□□ -2.06
SMC4-219ENST00000487747 CYP3A5P20815 502 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 GABRR1P24046 479 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 GPC3P51654 580 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 RAG2P55895 527 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 PTGES3Q15185 160 aaKnown RBP2.21□□□□□ -2.06
SMC4-219ENST00000487747 RPS6KA1Q15418 735 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 OR2B11Q5JQS5 317 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 PRR5LQ6MZQ0 368 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 RDH5Q92781 318 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 C18orf25Q96B23 403 aaPredicted RBP2.21□□□□□ -2.06
SMC4-219ENST00000487747 SLC35E1Q96K37 410 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 BAG1Q99933 345 aaPredicted RBP2.21□□□□□ -2.06
SMC4-219ENST00000487747 TMEM206Q9H813 350 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 NECAP2Q9NVZ3 263 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 ARMCX3Q9UH62 379 aaPredicted RBP2.21□□□□□ -2.06
SMC4-219ENST00000487747 KLHDC2Q9Y2U9 406 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 CACNG2Q9Y698 323 aa2.21□□□□□ -2.06
SMC4-219ENST00000487747 TTI1O43156 1089 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 ECDO95905 644 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms