RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 FAM90A27PA6NNH2 459 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 ESPNB1AK53 854 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 SUSD5O60279 629 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 UGT2B11O75310 529 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 BCAS2O75934 225 aaPredicted RBP16.17■□□□□ 0.18
COL6A1-204ENST00000486023 AGAP20933 346 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 DRD5P21918 477 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 ACVR2AP27037 513 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 NTSP30990 170 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 NUP107P57740 925 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 RPL38P63173 70 aaKnown RBP16.17■□□□□ 0.18
COL6A1-204ENST00000486023 ZNF155Q12901 538 aaPredicted RBP16.17■□□□□ 0.18
COL6A1-204ENST00000486023 ANGPTL8Q6UXH0 198 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 Q6ZSR9 355 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 SLC44A2Q8IWA5 706 aaPredicted RBP16.17■□□□□ 0.18
COL6A1-204ENST00000486023 C17orf47Q8NEP4 570 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 OR2T11Q8NH01 316 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 ZNF675Q8TD23 568 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 TSSK3Q96PN8 268 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 ADOQ96SZ5 270 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 TRMOQ9BU70 441 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 UCK2Q9BZX2 261 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 RUBCNLQ9H714 662 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 FOLH1BQ9HBA9 442 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 EML4Q9HC35 981 aaKnown RBP16.17■□□□□ 0.18
COL6A1-204ENST00000486023 GALNT9Q9HCQ5 603 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 MYNNQ9NPC7 610 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 SIRT5Q9NXA8 310 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 MKS1Q9NXB0 559 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 BAIAP2L1Q9UHR4 511 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 RNF6Q9Y252 685 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 GPR55Q9Y2T6 319 aaPredicted RBP16.17■□□□□ 0.18
COL6A1-204ENST00000486023 SLC6A5Q9Y345 797 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 OR10H1Q9Y4A9 318 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 TRAF6Q9Y4K3 522 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 CCL27Q9Y4X3 112 aa16.17■□□□□ 0.18
COL6A1-204ENST00000486023 FRG2CA6NGY1 282 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 MYO1GB0I1T2 1018 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 ACOX3O15254 700 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 RGS16O15492 202 aaPredicted RBP16.16■□□□□ 0.18
COL6A1-204ENST00000486023 NPHS1O60500 1241 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 HCN1O60741 890 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 ERN1O75460 977 aaKnown RBP16.16■□□□□ 0.18
COL6A1-204ENST00000486023 PRF1P14222 555 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 IL12BP29460 328 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 MC3RP41968 323 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 GSTM5P46439 218 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 RFTN2Q52LD8 501 aaPredicted RBP16.16■□□□□ 0.18
COL6A1-204ENST00000486023 KANK2Q63ZY3 851 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 MCEMP1Q8IX19 187 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 CLYBLQ8N0X4 340 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 OR4N2Q8NGD1 307 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 OR1J4Q8NGS1 313 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 PPP1R14CQ8TAE6 165 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 NEIL3Q8TAT5 605 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 FAM76AQ8TAV0 307 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 TWIST2Q8WVJ9 160 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 HGDQ93099 445 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 COL21A1Q96P44 957 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 SECISBP2Q96T21 854 aaKnown RBP16.16■□□□□ 0.18
COL6A1-204ENST00000486023 TUBB1Q9H4B7 451 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 GLIPR2Q9H4G4 154 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 TAS2R9Q9NYW1 312 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 SH3BP4Q9P0V3 963 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 MAPRE3Q9UPY8 281 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 DNAJC15Q9Y5T4 150 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 ITPR2Q14571 2701 aa16.16■□□□□ 0.18
COL6A1-204ENST00000486023 EML6Q6ZMW3 1958 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 GTF3C1Q12789 2109 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 NKX2-6A6NCS4 301 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 PIP5K1BO14986 540 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 ICOSLGO75144 302 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 NAGAP17050 411 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 ENDOUP21128 410 aaKnown RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 GPC1P35052 558 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 RFX3P48380 749 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 KIAA0040Q15053 153 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 EIPR1Q53HC9 387 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 WIPI1Q5MNZ9 446 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 NPSR1Q6W5P4 371 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 B3GNT6Q6ZMB0 384 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 ACAD11Q709F0 780 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 LARP4Q71RC2 724 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 ZNF551Q7Z340 670 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 SZRD1Q7Z422 152 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 WDR53Q7Z5U6 358 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 YRDCQ86U90 279 aaKnown RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 EFHD2Q96C19 240 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 TMCO6Q96DC7 493 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 PKNOX2Q96KN3 472 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 PCNX1Q96RV3 2341 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 OSBPL11Q9BXB4 747 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 ACKR4Q9NPB9 350 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 RYDENQ9NUL5 291 aaKnown RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 DDX18Q9NVP1 670 aaKnown RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 GIMAP2Q9UG22 337 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 EXO1Q9UQ84 846 aaKnown RBP16.15■□□□□ 0.18
COL6A1-204ENST00000486023 C15orf41Q9Y2V0 281 aa16.15■□□□□ 0.18
COL6A1-204ENST00000486023 PRAMEF25A6NGN4 478 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms