RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SLC18A2Q05940 514 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 DUSP8Q13202 625 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 CDSNQ15517 529 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 SH2D4BQ5SQS7 431 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 NOXRED1Q6NXP6 359 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 EMBQ6PCB8 327 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 ANGPTL8Q6UXH0 198 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 MEX3BQ6ZN04 569 aaKnown RBP14.05□□□□□ -0.16
CDK9-203ENST00000480353 TRIM46Q7Z4K8 759 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 DDIASQ8IXT1 998 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 PM20D2Q8IYS1 436 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 RPRMLQ8N4K4 120 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 LILRB4Q8NHJ6 448 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 TMBIM1Q969X1 311 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 CTHRC1Q96CG8 243 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 TMEM41AQ96HV5 264 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 COL21A1Q96P44 957 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 GNRHR2Q96P88 292 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 TTYH2Q9BSA4 534 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 TRMOQ9BU70 441 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 ROPN1BQ9BZX4 212 aaPredicted RBP14.05□□□□□ -0.16
CDK9-203ENST00000480353 ROPN1Q9HAT0 212 aaPredicted RBP14.05□□□□□ -0.16
CDK9-203ENST00000480353 PROK2Q9HC23 129 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 MYNNQ9NPC7 610 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 SIRT5Q9NXA8 310 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 SPRR3Q9UBC9 169 aa14.05□□□□□ -0.16
CDK9-203ENST00000480353 NKX2-6A6NCS4 301 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 PRAMEF25A6NGN4 478 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 C19orf84I3L1E1 186 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 ABCB7O75027 752 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 SPAG7O75391 227 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 SLITRK5O94991 958 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 NUDT17P0C025 328 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 GPC1P35052 558 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 EMDP50402 254 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 SNTA1Q13424 505 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 EFR3AQ14156 821 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 PCLAFQ15004 111 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 ZNHIT3Q15649 155 aaPredicted RBP14.04□□□□□ -0.16
CDK9-203ENST00000480353 IKBIPQ70UQ0 350 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 SLC44A2Q8IWA5 706 aaPredicted RBP14.04□□□□□ -0.16
CDK9-203ENST00000480353 FAM111AQ96PZ2 611 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 ANKRA2Q9H9E1 313 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 FOLH1BQ9HBA9 442 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 LRTM1Q9HBL6 345 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 DDX18Q9NVP1 670 aaKnown RBP14.04□□□□□ -0.16
CDK9-203ENST00000480353 C1orf109Q9NX04 203 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 MAPRE3Q9UPY8 281 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 CAMK2AQ9UQM7 478 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 C15orf41Q9Y2V0 281 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 CELSR2Q9HCU4 2923 aa14.04□□□□□ -0.16
CDK9-203ENST00000480353 NOTCH2Q04721 2471 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 UGT2B11O75310 529 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 GLI4P10075 376 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 PRF1P14222 555 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 DDX5P17844 614 aaKnown RBP14.03□□□□□ -0.16
CDK9-203ENST00000480353 SSTR2P30874 369 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 CDK9P50750 372 aaKnown RBP14.03□□□□□ -0.16
CDK9-203ENST00000480353 GALNTL6Q49A17 601 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 TIGD3Q6B0B8 471 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 FAM71E1Q6IPT2 247 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 TMEM107Q6UX40 140 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 LARP4Q71RC2 724 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDK9-203ENST00000480353 WDR53Q7Z5U6 358 aaPredicted RBP14.03□□□□□ -0.16
CDK9-203ENST00000480353 TRABD2AQ86V40 505 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 SIMC1Q8NDZ2 872 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 OR14L1PQ8NHC6 308 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 PPP1R14CQ8TAE6 165 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 HGDQ93099 445 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 LRRC46Q96FV0 321 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 METTL2AQ96IZ6 378 aaKnown RBP14.03□□□□□ -0.16
CDK9-203ENST00000480353 BTBD9Q96Q07 612 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 NODALQ96S42 347 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 ADOQ96SZ5 270 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 SPOCK3Q9BQ16 436 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 GATA5Q9BWX5 397 aaPredicted RBP14.03□□□□□ -0.16
CDK9-203ENST00000480353 UCK2Q9BZX2 261 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 MKS1Q9NXB0 559 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 MRTO4Q9UKD2 239 aaKnown RBP14.03□□□□□ -0.16
CDK9-203ENST00000480353 GPR55Q9Y2T6 319 aaPredicted RBP14.03□□□□□ -0.16
CDK9-203ENST00000480353 SLC6A5Q9Y345 797 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 PCDHGB3Q9Y5G1 929 aa14.03□□□□□ -0.16
CDK9-203ENST00000480353 PKDREJQ9NTG1 2253 aa14.02□□□□□ -0.16
CDK9-203ENST00000480353 HCFC1P51610 2035 aa14.02□□□□□ -0.16
CDK9-203ENST00000480353 C2orf72A6NCS6 295 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 OR6C70A6NIJ9 312 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 AHRRA9YTQ3 701 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 MYO1GB0I1T2 1018 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 SNPHO15079 494 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 TO15178 435 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 NPHS1O60500 1241 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 PLOD3O60568 738 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 ICOSLGO75144 302 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 HPNP05981 417 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 LINC00032P0C843 101 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 ENDOUP21128 410 aaKnown RBP14.02□□□□□ -0.17
CDK9-203ENST00000480353 ALDH3A1P30838 453 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 MC3RP41968 323 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 KIR3DL1P43629 444 aa14.02□□□□□ -0.17
CDK9-203ENST00000480353 CORO7P57737 925 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms