RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 MLLT1Q03111 559 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 SRSF5Q13243 272 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 SEC23BQ15437 767 aa17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 PRICKLE4Q2TBC4 344 aa17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 ZNF770Q6IQ21 691 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 RSL24D1Q9UHA3 163 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 SLC13A4Q9UKG4 626 aa17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 ACAD8Q9UKU7 415 aa17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 MKLN1Q9UL63 735 aa17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 A4GNTQ9UNA3 340 aa17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 THADAQ6YHU6 1953 aa17.12■□□□□ 0.33
SEC61A2-213ENST00000475268 HYKKA2RU49 373 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 ARRDC5A6NEK1 342 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 TPST2O60704 377 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 ZBTB11O95625 1053 aaPredicted RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 HTR1AP08908 422 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 SKP1P63208 163 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 MAT1AQ00266 395 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 RAB39AQ14964 217 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 EXOSC7Q15024 291 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 LAIR1Q6GTX8 287 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 SLC25A45Q8N413 288 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 PEX11GQ96HA9 241 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 DHRS1Q96LJ7 313 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 FANCEQ9HB96 536 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 VCX3AQ9NNX9 186 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 PAK1IP1Q9NWT1 392 aaPredicted RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 MAT2BQ9NZL9 334 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 COMMD3-BMI1R4GMX3 469 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 COL6A3P12111 3177 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 A0A087WV62 115 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 PCDHGA12O60330 932 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 OR10H2O60403 315 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 PLOD3O60568 738 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 CDC123O75794 336 aaPredicted RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 CT62P0C5K7 136 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 RNH1P13489 461 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 GABRA4P48169 554 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 FNTBP49356 437 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 EPHA4P54764 986 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 NUP107P57740 925 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 SMIM11AP58511 58 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 SLC13A2Q13183 592 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 SMN1Q16637 294 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 CLVS1Q8IUQ0 354 aaPredicted RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 ENTHD1Q8IYW4 607 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 SPARTQ8N0X7 666 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 METTL27Q8N6F8 245 aaPredicted RBP17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 ZNF566Q969W8 418 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 FNDC11Q9BVV2 318 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 CXorf21Q9HAI6 301 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 CTPS2Q9NRF8 586 aa17.11■□□□□ 0.33
SEC61A2-213ENST00000475268 VCANP13611 3396 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 FAAHO00519 579 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 OR10H3O60404 316 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 MYF5P13349 255 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 GGT2P36268 569 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 MGAT2Q10469 447 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 SYT16Q17RD7 645 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 ARHGAP11BQ3KRB8 267 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 AMZ1Q400G9 498 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 CCNJQ5T5M9 372 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 KLHL17Q6TDP4 642 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 FRRS1Q6ZNA5 592 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 OR52P1PQ8NH57 321 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 FAM81AQ8TBF8 368 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 CCDC90BQ9GZT6 254 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 EPHA6Q9UF33 1036 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 WDR45Q9Y484 360 aa17.1■□□□□ 0.33
SEC61A2-213ENST00000475268 FRS3O43559 492 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SLC35E2P0CK97 266 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 IDH2P48735 452 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 ERV3-1Q14264 604 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 KCNAB1Q14722 419 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 NPTX1Q15818 432 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 PROX2Q3B8N5 592 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 B3GNT6Q6ZMB0 384 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 DGAT2L6Q6ZPD8 337 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SLC35F3Q8IY50 421 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 Q8N9G6 341 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SLC7A13Q8TCU3 470 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 ZNF675Q8TD23 568 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 MMABQ96EY8 250 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 ZNF285Q96NJ3 590 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 NODALQ96S42 347 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 PRR14Q9BWN1 585 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SPRTNQ9H040 489 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 RAB33BQ9H082 229 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 PIGUQ9H490 435 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SCN3BQ9NY72 215 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 RNF6Q9Y252 685 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 GPR55Q9Y2T6 319 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 TPRKBQ9Y3C4 175 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SNX5Q9Y5X3 404 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 ENO4A6NNW6 628 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SYT5O00445 386 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 SLITRK5O94991 958 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 CPNE6O95741 557 aa17.09■□□□□ 0.33
SEC61A2-213ENST00000475268 PDGFBP01127 241 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms