RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 KLC3Q6P597 504 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 ACMSDQ8TDX5 336 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 C18orf12Q96KH6 178 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 TM9SF2Q99805 663 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 TMEM109Q9BVC6 243 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 NXF5Q9H1B4 397 aaKnown RBP18.02■□□□□ 0.48
VARS-221ENST00000463184 BEX4Q9NWD9 120 aaPredicted RBP18.02■□□□□ 0.48
VARS-221ENST00000463184 DOCK7Q96N67 2140 aa18.02■□□□□ 0.47
VARS-221ENST00000463184 TLDC2A0PJX2 215 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 SNPHO15079 494 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 ICOSLGO75144 302 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 CBR3O75828 277 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 RCBTB2O95199 551 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 KLK1P06870 262 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 LTBQ06643 244 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 C10orf62Q5T681 223 aaPredicted RBP18.01■□□□□ 0.47
VARS-221ENST00000463184 ENPP6Q6UWR7 440 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 PAGE2Q7Z2X7 111 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 PLD6Q8N2A8 252 aaKnown RBP18.01■□□□□ 0.47
VARS-221ENST00000463184 VWA5B2Q8N398 1253 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 HGDQ93099 445 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 ATP6V1E2Q96A05 226 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 GPR78Q96P69 363 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 UCN2Q96RP3 112 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 TUBA1CQ9BQE3 449 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 OSBPL11Q9BXB4 747 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 ACBD3Q9H3P7 528 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 NOL11Q9H8H0 719 aaKnown RBP18.01■□□□□ 0.47
VARS-221ENST00000463184 EXO1Q9UQ84 846 aaKnown RBP18.01■□□□□ 0.47
VARS-221ENST00000463184 DTX4Q9Y2E6 619 aa18.01■□□□□ 0.47
VARS-221ENST00000463184 GOLGA6L10A6NI86 522 aa18■□□□□ 0.47
VARS-221ENST00000463184 ACOX3O15254 700 aa18■□□□□ 0.47
VARS-221ENST00000463184 GUCY1B2O75343 617 aa18■□□□□ 0.47
VARS-221ENST00000463184 SIX3O95343 332 aaPredicted RBP18■□□□□ 0.47
VARS-221ENST00000463184 RBP1P09455 135 aa18■□□□□ 0.47
VARS-221ENST00000463184 CD53P19397 219 aa18■□□□□ 0.47
VARS-221ENST00000463184 ARL1P40616 181 aaPredicted RBP18■□□□□ 0.47
VARS-221ENST00000463184 PTGDSP41222 190 aa18■□□□□ 0.47
VARS-221ENST00000463184 CPA2P48052 419 aa18■□□□□ 0.47
VARS-221ENST00000463184 CCNG1P51959 295 aa18■□□□□ 0.47
VARS-221ENST00000463184 EEF1A1P68104 462 aaKnown RBP18■□□□□ 0.47
VARS-221ENST00000463184 MAP4K2Q12851 820 aa18■□□□□ 0.47
VARS-221ENST00000463184 FOXF2Q12947 444 aa18■□□□□ 0.47
VARS-221ENST00000463184 PRICKLE4Q2TBC4 344 aa18■□□□□ 0.47
VARS-221ENST00000463184 BEND6Q5SZJ8 279 aaPredicted RBP18■□□□□ 0.47
VARS-221ENST00000463184 CCNYL2Q5T2Q4 361 aa18■□□□□ 0.47
VARS-221ENST00000463184 EEF1A1P5Q5VTE0 462 aa18■□□□□ 0.47
VARS-221ENST00000463184 SHEQ5VZ18 495 aa18■□□□□ 0.47
VARS-221ENST00000463184 FRG2Q64ET8 278 aa18■□□□□ 0.47
VARS-221ENST00000463184 SCIMPQ6UWF3 145 aa18■□□□□ 0.47
VARS-221ENST00000463184 ADGRE4PQ86SQ3 457 aa18■□□□□ 0.47
VARS-221ENST00000463184 LCA5Q86VQ0 697 aa18■□□□□ 0.47
VARS-221ENST00000463184 TRPC4APQ8TEL6 797 aa18■□□□□ 0.47
VARS-221ENST00000463184 SMPDL3BQ92485 455 aa18■□□□□ 0.47
VARS-221ENST00000463184 WNT2BQ93097 391 aa18■□□□□ 0.47
VARS-221ENST00000463184 LCORQ96JN0 433 aaPredicted RBP18■□□□□ 0.47
VARS-221ENST00000463184 CDK15Q96Q40 435 aa18■□□□□ 0.47
VARS-221ENST00000463184 FRG2BQ96QU4 278 aa18■□□□□ 0.47
VARS-221ENST00000463184 NODALQ96S42 347 aa18■□□□□ 0.47
VARS-221ENST00000463184 BRINP2Q9C0B6 783 aa18■□□□□ 0.47
VARS-221ENST00000463184 PIGMQ9H3S5 423 aa18■□□□□ 0.47
VARS-221ENST00000463184 GALNT8Q9NY28 637 aa18■□□□□ 0.47
VARS-221ENST00000463184 KLRF1Q9NZS2 232 aa18■□□□□ 0.47
VARS-221ENST00000463184 CPSF2Q9P2I0 782 aaKnown RBP18■□□□□ 0.47
VARS-221ENST00000463184 EXPH5Q8NEV8 1989 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 C1orf226A1L170 272 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 SH3D21A4FU49 640 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 H0Y3Z8 333 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 OR7A17O14581 309 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 CASKO14936 926 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 ATP1B1P05026 303 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 INHBBP09529 407 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 ADSLP30566 484 aaPredicted RBP17.99■□□□□ 0.47
VARS-221ENST00000463184 SOX18P35713 384 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 NKX6-1P78426 367 aaPredicted RBP17.99■□□□□ 0.47
VARS-221ENST00000463184 TTC19Q6DKK2 380 aaPredicted RBP17.99■□□□□ 0.47
VARS-221ENST00000463184 LUZP2Q86TE4 346 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 OMA1Q96E52 524 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 SMR3AQ99954 134 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 NTMT1Q9BV86 223 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 OR2B2Q9GZK3 357 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 BCAP29Q9UHQ4 241 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 LGALS13Q9UHV8 139 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 ZNF639Q9UID6 485 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 CES1P1Q9UKY3 287 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 PCDHA9Q9Y5H5 950 aa17.99■□□□□ 0.47
VARS-221ENST00000463184 A0A1W2PPM1 405 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 C2orf72A6NCS6 295 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 PYGBP11216 843 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 CSNK2A2P19784 350 aaPredicted RBP17.98■□□□□ 0.47
VARS-221ENST00000463184 CHMP24386 653 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 MAPK12P53778 367 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 SRYQ05066 204 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 PLCXD2Q0VAA5 305 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 MGAT2Q10469 447 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 IFT88Q13099 833 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 GAB1Q13480 694 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 POU4F3Q15319 338 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 NNATQ16517 81 aa17.98■□□□□ 0.47
VARS-221ENST00000463184 TECRLQ5HYJ1 363 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms