RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ADGRL4Q9HBW9 690 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 VAT1LQ9HCJ6 419 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 POLE3Q9NRF9 147 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 SLC7A10Q9NS82 523 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 P2RX2Q9UBL9 471 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF490Q9ULM2 529 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 MGAT4BQ9UQ53 548 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 NISCHQ9Y2I1 1504 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 HCFC1P51610 2035 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 FAM230AA0A1W2PPH8 454 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 ANKRD30BLA7E2S9 258 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 FOXI3A8MTJ6 420 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 F8WDY8 70 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 BUB1O43683 1085 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 RANBP6O60518 1105 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 VPS26AO75436 327 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 TOM1L1O75674 476 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 STK17BO94768 372 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 SEMA4FO95754 770 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 OAS1P00973 400 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 CA3P07451 260 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 FCGR3AP08637 254 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 CCDC159P0C7I6 412 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 HSD17B1P14061 328 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 CYP2F1P24903 491 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 UCP1P25874 307 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 RFC2P35250 354 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 ELK3P41970 407 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 RPL34P49207 117 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 SGSHP51688 502 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 KRTAP10-3P60369 221 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 SRYQ05066 204 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 SCGB2A2Q13296 93 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 CCL14Q16627 93 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 SHROOM1Q2M3G4 852 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF699Q32M78 642 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 WDR25Q64LD2 544 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 ARMCX5Q6P1M9 558 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 ARSKQ6UWY0 536 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 APOOLQ6UXV4 268 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 MISPQ8IVT2 679 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 CERS5Q8N5B7 392 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 SUMF1Q8NBK3 374 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 OR4F17Q8NGA8 305 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 OR52J3Q8NH60 311 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 MCHR2Q969V1 340 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 BIRC7Q96CA5 298 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 CCDC51Q96ER9 411 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 OR4F4Q96R69 305 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 CPXM1Q96SM3 734 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 CCSER1Q9C0I3 900 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 ECT2Q9H8V3 914 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF581Q9P0T4 197 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 SH3BGRL2Q9UJC5 107 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 FZR1Q9UM11 496 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 AP1M2Q9Y6Q5 423 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 NCAPD2Q15021 1401 aa2.87□□□□□ -1.95
TRAPPC13-204ENST00000438419 A0A0A6YYD4 124 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 PHF1O43189 567 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 SRSF10O75494 262 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 ECDO95905 644 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 AK1P00568 194 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 HEXBP07686 556 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 BCL3P20749 454 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 PPP2R1BP30154 601 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 TRPC1P48995 793 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 HERVK_113P63132 956 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 ERVK-8P63133 956 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 NAAAQ02083 359 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 HSF2Q03933 536 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 KLHL30Q0D2K2 578 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 BNIP1Q12981 228 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 PCK2Q16822 640 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 ACSF3Q4G176 576 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 EIPR1Q53HC9 387 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 SLC25A30Q5SVS4 291 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 BEND6Q5SZJ8 279 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 LEMD1Q68G75 181 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 AFTPHQ6ULP2 937 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 REG3GQ6UW15 175 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 MOB2Q70IA6 237 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 CEACAM19Q7Z692 300 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 RANBP3LQ86VV4 465 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 ARFGAP2Q8N6H7 521 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 TEX9Q8N6V9 391 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 LHX4Q969G2 390 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 RBM18Q96H35 190 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 TSPAN18Q96SJ8 248 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 THUMPD2Q9BTF0 503 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 GPR174Q9BXC1 333 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 ERVK-6Q9BXR3 956 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 COQ10BQ9H8M1 238 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 ATXN10Q9UBB4 475 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 CIDEBQ9UHD4 219 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 EMCNQ9ULC0 261 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 RALGAPA1Q6GYQ0 2036 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 SYNJ2O15056 1496 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 CC2D2AQ9P2K1 1620 aa2.86□□□□□ -1.95
TRAPPC13-204ENST00000438419 A0A087WZY1 265 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 A0A0U1RQV5 110 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms