RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 NXF3Q9H4D5 531 aaKnown RBP3.26□□□□□ -1.89
CCDC30-203ENST00000428554 CD274Q9NZQ7 290 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 CCNL1Q9UK58 526 aaPredicted RBP3.26□□□□□ -1.89
CCDC30-203ENST00000428554 IKZF3Q9UKT9 509 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 EMCNQ9ULC0 261 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 RPH3ALQ9UNE2 315 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 ICKQ9UPZ9 632 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 KLK4Q9Y5K2 254 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 BIVM-ERCC5R4GMW8 1640 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 SNED1Q8TER0 1413 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 ZMYM3Q14202 1370 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 PBRM1Q86U86 1689 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 SMIM23A6NLE4 172 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 E7EWF7 191 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 BIRC5O15392 142 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 OR10H3O60404 316 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 GP1BAP07359 652 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 NR2F6P10588 404 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 MSH3P20585 1137 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 DUSP1P28562 367 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 LAP3P28838 519 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 CASP14P31944 242 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 PTGER4P35408 488 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 PCK1P35558 622 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 SLC1A2P43004 574 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 RFX5P48382 616 aaPredicted RBP3.26□□□□□ -1.89
CCDC30-203ENST00000428554 TNFSF10P50591 281 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 MRPS25P82663 173 aaKnown RBP3.26□□□□□ -1.89
CCDC30-203ENST00000428554 CUL3Q13618 768 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 RNF151Q2KHN1 245 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 PRR31Q5SQ13 230 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 ARHGEF19Q8IW93 802 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 ZNF786Q8N393 782 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 TRAM1L1Q8N609 369 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 CCDC185Q8N715 623 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 CNBD1Q8NA66 436 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 SLC38A9Q8NBW4 561 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 FBXO36Q8NEA4 188 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 GDPD5Q8WTR4 605 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 SMPDL3AQ92484 453 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 GLG1Q92896 1179 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 RMND5BQ96G75 393 aaPredicted RBP3.26□□□□□ -1.89
CCDC30-203ENST00000428554 SFXN2Q96NB2 322 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 TECTBQ96PL2 329 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 DYRK4Q9NR20 520 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 COPS7AQ9UBW8 275 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 MRM2Q9UI43 246 aaKnown RBP3.26□□□□□ -1.89
CCDC30-203ENST00000428554 SERTAD3Q9UJW9 196 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 FLVCR2Q9UPI3 526 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 TNNQ9UQP3 1299 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 SLC22A13Q9Y226 551 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 URGCP-MRPS24S4R325 110 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 DLC1Q96QB1 1528 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 PTPRCP08575 1304 aa3.26□□□□□ -1.89
CCDC30-203ENST00000428554 PPIAL4CA0A0B4J2A2 164 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 KBTBD11-OT1A0A1B0GTJ5 212 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 A0A1W2PPK0 400 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 MROH6A6NGR9 719 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 SRRM3A6NNA2 597 aaPredicted RBP3.25□□□□□ -1.89
CCDC30-203ENST00000428554 DLGAP1O14490 977 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 DYNC1I1O14576 645 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 LDB2O43679 373 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 SMIM24O75264 130 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 CLDN7O95471 211 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 HLA-DQA2P01906 255 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 PPIAL4GP0DN37 164 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 BGNP21810 368 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 HNRNPH3P31942 346 aaKnown RBP3.25□□□□□ -1.89
CCDC30-203ENST00000428554 CXCR5P32302 372 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 LBX1P52954 281 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 CLRN1P58418 232 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 DLX2Q07687 328 aaPredicted RBP3.25□□□□□ -1.89
CCDC30-203ENST00000428554 DMWDQ09019 674 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 GRIK2Q13002 908 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 KRT33BQ14525 404 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 SLC15A2Q16348 729 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 PTGISQ16647 500 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 EXOC3L4Q17RC7 722 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 TCTN1Q2MV58 587 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 QRICH1Q2TAL8 776 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 CTU2Q2VPK5 515 aaKnown RBP3.25□□□□□ -1.89
CCDC30-203ENST00000428554 CHRFAM7AQ494W8 412 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 AKIRIN2Q53H80 203 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 SFT2D3Q587I9 215 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 TEX30Q5JUR7 227 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 TSTD2Q5T7W7 516 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 FAM166AQ6J272 317 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 ADAM5Q6NVV9 412 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 TRMT10BQ6PF06 316 aaKnown RBP3.25□□□□□ -1.89
CCDC30-203ENST00000428554 LARP4Q71RC2 724 aaKnown RBP eCLIP3.25□□□□□ -1.89
CCDC30-203ENST00000428554 DPPA4Q7L190 304 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 H2BFWTQ7Z2G1 175 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 PLD3Q8IV08 490 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 ALLCQ8N6M5 410 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 CCDC71LQ8N9Z2 235 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 WDR20Q8TBZ3 569 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 ZNF473Q8WTR7 871 aaKnown RBP3.25□□□□□ -1.89
CCDC30-203ENST00000428554 OSCP1Q8WVF1 389 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 TMEM239Q8WW34 195 aa3.25□□□□□ -1.89
CCDC30-203ENST00000428554 FAM3CQ92520 227 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms