RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 GON4LQ3T8J9 2241 aa3.66□□□□□ -1.82
RAB3GAP1-202ENST00000425393 TRAV9-2A0A087WT02 112 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 TYROBPO43914 113 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 RANBP6O60518 1105 aaKnown RBP3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 NDUFA7O95182 113 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 NUDT14O95848 222 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PROS1P07225 676 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 WNT2P09544 360 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ATP6V1E1P36543 226 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 BRCC3P46736 316 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 RPL34P49207 117 aaKnown RBP3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ARHGDIAP52565 204 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 WASHC5Q12768 1159 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 NME3Q13232 169 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PDIA5Q14554 519 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ABRAXAS2Q15018 415 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PARP10Q53GL7 1025 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 UTF1Q5T230 341 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 LEG1Q6P5S2 330 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 APOOLQ6UXV4 268 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 GOLGA7Q7Z5G4 137 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SLC22A18ASQ8N1D0 253 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 KDM8Q8N371 416 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 TBCKQ8TEA7 893 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 LHX4Q969G2 390 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 RAB3CQ96E17 227 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 C14orf79Q96F83 325 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 MCCC1Q96RQ3 725 aaPredicted RBP3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 HSD3B7Q9H2F3 369 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 NINJ2Q9NZG7 142 aa3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ZNF107Q9UII5 783 aaPredicted RBP3.65□□□□□ -1.83
RAB3GAP1-202ENST00000425393 RNF103-CHMP3A0A140T963 221 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 FBLL1A6NHQ2 334 aaKnown RBP3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 KLLNB2CW77 178 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 E9PMD0 336 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SGK494L7N484 410 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 EI24O14681 340 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 IGKV3-15P01624 115 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 DUX4L4P0CJ87 422 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PRG2P13727 222 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PRDX6P30041 224 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SLC7A2P52569 658 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 MYBPC1Q00872 1141 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SNX1Q13596 522 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 TGIF1Q15583 401 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 CCDC40Q4G0X9 1142 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 MS4A13Q5J8X5 152 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 OR4F17Q8NGA8 305 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SLC25A36Q96CQ1 311 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 C11orf24Q96F05 449 aaPredicted RBP3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SAMD8Q96LT4 415 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 OR4F4Q96R69 305 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 WRAP53Q9BUR4 548 aaKnown RBP3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 NMNAT2Q9BZQ4 307 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 RNF41Q9H4P4 317 aaPredicted RBP3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ESM1Q9NQ30 184 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ZNF490Q9ULM2 529 aaPredicted RBP3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PIN4Q9Y237 131 aaKnown RBP3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 RNF115Q9Y4L5 304 aa3.64□□□□□ -1.83
RAB3GAP1-202ENST00000425393 LRIT2A6NDA9 550 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 NPIPA2E9PIF3 369 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 K7ERI5 159 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SAP18O00422 153 aaKnown RBP3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 TSC22D2O75157 780 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ETS1P14921 441 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PTPN6P29350 595 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ATXN3P54252 364 aaPredicted RBP3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 HMGCS2P54868 508 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 CARTPTQ16568 116 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PPP1R3AQ16821 1122 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ATAD3CQ5T2N8 411 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 CCDC36Q8IYA8 594 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ARFGAP2Q8N6H7 521 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 FAM71CQ8NEG0 241 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 OR56B1Q8NGI3 324 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 WDR36Q8NI36 951 aaKnown RBP3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ZPLD1Q8TCW7 415 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ZBED6CLQ96FA7 236 aaPredicted RBP3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 C9orf85Q96MD7 179 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 TSPAN18Q96SJ8 248 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 APOOQ9BUR5 198 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 IMPAD1Q9NX62 359 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 GPR83Q9NYM4 423 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SLC9A8Q9Y2E8 581 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 RPGRIP1LQ68CZ1 1315 aa3.63□□□□□ -1.83
RAB3GAP1-202ENST00000425393 RNF222A6NCQ9 220 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 MFSD2BA6NFX1 497 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 ZSCAN5CA6NGD5 496 aaPredicted RBP3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PHOX2AO14813 284 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 CFLARO15519 480 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 LRRTM2O43300 516 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 SSX5O60225 188 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 IGSF6O95976 241 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 MT-ATP6P00846 226 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 TGFAP01135 160 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 GIG44P09565 113 aaPredicted RBP3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 CCDC192P0DO97 292 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PVRP15151 417 aa3.62□□□□□ -1.83
RAB3GAP1-202ENST00000425393 PRDX2P32119 198 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms