RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 NRMQ8IXM6 262 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 BBS1Q8NFJ9 593 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 FBLIM1Q8WUP2 373 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CAPSLQ8WWF8 208 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 KLHL6Q8WZ60 621 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 ZNF354BQ96LW1 612 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 NEUROD4Q9HD90 331 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 ZNF780BQ9Y6R6 833 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 HSPE1-MOB4S4R3N1 261 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 LOC105369274A0A096LPK9 316 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 LOC102723532A0A0G2JNH3 316 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 CPN2P22792 545 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 ETV5P41161 510 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 KCNJ5P48544 419 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 ETV1P50549 477 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 PDX1P52945 283 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 ERV3-1Q14264 604 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 TRMT12Q53H54 448 aaKnown RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 PRRT3Q5FWE3 981 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 RASGRP3Q8IV61 690 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 SLC7A5P1Q8MH63 180 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 OR4N4Q8N0Y3 316 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 OR2L3Q8NG85 312 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 QRFPRQ96P65 431 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 NEDD4LQ96PU5 975 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 OR51V1Q9H2C8 321 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 INIPQ9NRY2 104 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 THAP10Q9P2Z0 257 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 GMEB1Q9Y692 573 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 MUC3AQ02505 3323 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 AGAP5A6NIR3 686 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 GYPBP06028 91 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 HBQ1P09105 142 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 NT5EP21589 574 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 TRHRP34981 398 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 DPTQ07507 201 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 HNRNPA0Q13151 305 aaKnown RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 RPE65Q16518 533 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 FAM214AQ32MH5 1076 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 ZNF658BQ4V348 819 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 CDC73Q6P1J9 531 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 CCBE1Q6UXH8 406 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 LYSMD2Q8IV50 215 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 SLC30A8Q8IWU4 369 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 KBTBD8Q8NFY9 601 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 MS4A6EQ96DS6 147 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 CNDP2Q96KP4 475 aaKnown RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 NKX2-4Q9H2Z4 354 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 FTSJ1Q9UET6 329 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 MRPS2Q9Y399 296 aaKnown RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 TSC22D4Q9Y3Q8 395 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 OR6C74A6NCV1 312 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 METTL15A6NJ78 407 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 MAGEB4O15481 346 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 ACADMP11310 421 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 CSNK2A2P19784 350 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 ATP5A1P25705 553 aaKnown RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 PSMA1P25786 263 aaKnown RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 PPP5CP53041 499 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 RUNX1T1Q06455 604 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 UBE2UQ5VVX9 321 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 CYB561A3Q8NBI2 242 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 DENND6BQ8NEG7 585 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 GOT1L1Q8NHS2 421 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 TMEM255BQ8WV15 326 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 RLN3Q8WXF3 142 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 OR1E3Q8WZA6 343 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 SIPA1Q96FS4 1042 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 TRNT1Q96Q11 434 aaKnown RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 BTBD2Q9BX70 525 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 MMP28Q9H239 520 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 TCEAL2Q9H3H9 227 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-213ENST00000421756 GIMAP4Q9NUV9 329 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 OSGIN1Q9UJX0 560 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 A4GNTQ9UNA3 340 aa12.55□□□□□ -0.4
MCF2L-213ENST00000421756 MAP1BP46821 2468 aaKnown RBP12.54□□□□□ -0.4
MCF2L-213ENST00000421756 A0A087WUU8 490 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 ZAR1LA6NP61 321 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 DVL2O14641 736 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 PRG2P13727 222 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 CELP19835 753 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 COL9A1P20849 921 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 AHRP35869 848 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 GIPRP48546 466 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 PPP2R2DQ66LE6 453 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 OR51A7Q8NH64 312 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 OR7D2Q96RA2 312 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 APOOQ9BUR5 198 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 EPHX3Q9H6B9 360 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 SEMA4GQ9NTN9 838 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 HRO43593 1189 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 CTSBP07858 339 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 MYL12AP19105 171 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 REEP5Q00765 189 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 EIF4HQ15056 248 aaKnown RBP12.54□□□□□ -0.4
MCF2L-213ENST00000421756 TMEM52BQ4KMG9 183 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 TMEM196Q5HYL7 178 aa12.54□□□□□ -0.4
MCF2L-213ENST00000421756 ARMC4Q5T2S8 1044 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms